RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 IPO9Q96P70 1041 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 MYOCQ99972 504 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 NUCKS1Q9H1E3 243 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 USP29Q9HBJ7 922 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 ANKMY1Q9P2S6 941 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 CEP83Q9Y592 693 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 K7ESM1 405 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 SUV39H1O43463 412 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 KLRC4O43908 158 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 LUC7L3O95232 432 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 ALPPL2P10696 532 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 NUMBP49757 651 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 DUSP3P51452 185 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 TBX4P57082 545 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 DAOAP59103 153 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 TAS2R38P59533 333 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 CNTN1Q12860 1018 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 STK38Q15208 465 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 SGO2Q562F6 1265 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 MS4A13Q5J8X5 152 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 RNF219Q5W0B1 726 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 SHC4Q6S5L8 630 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 CLEC14AQ86T13 490 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 CFAP52Q8N1V2 620 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 FRS2Q8WU20 508 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 SEMA4DQ92854 862 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 SPAG5Q96R06 1193 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 CCNL2Q96S94 520 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 MMRN2Q9H8L6 949 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 MAGEF1Q9HAY2 307 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 TSPAN16Q9UKR8 245 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 FRMD4BQ9Y2L6 1034 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 CACNA1DQ01668 2161 aa13.22□□□□□ -0.29
RABGGTA-213ENST00000560127 ZFC3H1O60293 1989 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 TYW5A2RUC4 315 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 PDXKO00764 312 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 SCAMP1O15126 338 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 SPTLC2O15270 562 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 SLC31A1O15431 190 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 POLR2DO15514 142 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 GABBR2O75899 941 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 NEBLO76041 1014 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 MOCS3O95396 460 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 PRLRP16471 622 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 AFMP43652 599 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 BST2Q10589 180 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 DCAF6Q58WW2 860 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 XKR5Q6UX68 686 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 GRAMD1CQ8IYS0 662 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 SLC22A18ASQ8N1D0 253 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 SCML4Q8N228 414 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 TTC39CQ8N584 583 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 OR13H1Q8NG92 308 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 UBA3Q8TBC4 463 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 KLK6Q92876 244 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 FCRL2Q96LA5 508 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 NOX5Q96PH1 765 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 CALN1Q9BXU9 219 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 PREBQ9HCU5 417 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 CNGB3Q9NQW8 809 aa13.21□□□□□ -0.29
RABGGTA-213ENST00000560127 NEMP2A6NFY4 417 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 CASC3O15234 703 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 MAPK13O15264 365 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 PPP6R2O75170 966 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 LCP1P13796 627 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 CDKN3Q16667 212 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 ZNF542PQ5EBM4 170 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 GUSBP11Q6P575 273 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 KCTD13Q8WZ19 329 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 EXTL1Q92935 676 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 ARRDC3Q96B67 414 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 FAXDC2Q96IV6 333 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 DDX50Q9BQ39 737 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 DUSP23Q9BVJ7 150 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 TMEM8AQ9HCN3 771 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 FZD3Q9NPG1 666 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 EVA1BQ9NVM1 165 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 ATXN7L1Q9ULK2 861 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 PPM1HQ9ULR3 514 aa13.2□□□□□ -0.3
RABGGTA-213ENST00000560127 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 A0A1W2PQU0 124 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 CPED1A4D0V7 1026 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 TNFSF15O95150 251 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 NNMTP40261 264 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 CLDN2P57739 230 aa13.19□□□□□ -0.3
RABGGTA-213ENST00000560127 SRSF6Q13247 344 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms