RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PLA2G4CQ9UP65 541 aa9.45□□□□□ -0.9
PRKCH-218ENST00000555628 SLC12A8A0AV02 714 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 PMS2P1A4D2B8 440 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 FAM47DPA6NHR8 397 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 H3BQV1 296 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 EFSO43281 561 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 STX6O43752 255 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 SDC3O75056 442 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 CKMT1AP12532 417 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 MSX1P28360 303 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 STAT6P42226 847 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 METAP1P53582 386 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 AP3M2P53677 418 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 ZNF445P59923 1031 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 ASIC1P78348 528 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 LINC00303Q3SY05 128 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 FAM26FQ5R3K3 315 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 LSMEM2Q8N112 164 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 KDM1BQ8NB78 822 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 TMEM145Q8NBT3 493 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 TAF4BQ92750 862 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 SKA1Q96BD8 255 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 MYEOVQ96EZ4 313 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 PRICKLE1Q96MT3 831 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-218ENST00000555628 BACH2Q9BYV9 841 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 ZNF358Q9NW07 568 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 UCKL1Q9NWZ5 548 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 SUN2Q9UH99 717 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 TPX2Q9ULW0 747 aaKnown RBP9.44□□□□□ -0.9
PRKCH-218ENST00000555628 HBS1LQ9Y450 684 aaKnown RBP9.44□□□□□ -0.9
PRKCH-218ENST00000555628 RP1P56715 2156 aa9.44□□□□□ -0.9
PRKCH-218ENST00000555628 SPTBN1Q01082 2364 aaKnown RBP9.44□□□□□ -0.9
PRKCH-218ENST00000555628 LRRC72A6NJI9 287 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 A6NJY4 79 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 USP12O75317 370 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 CSO75390 466 aaKnown RBP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 RNASEH2AO75792 299 aaKnown RBP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 RPN1P04843 607 aaKnown RBP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 ATP5BP06576 529 aaKnown RBP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 GP1BAP07359 652 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 GOT1P17174 413 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 DGKAP23743 735 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 SLC6A4P31645 630 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 YWHAGP61981 247 aaKnown RBP eCLIP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 ARID5AQ03989 594 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 OVGP1Q12889 678 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 BIRC3Q13489 604 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 SGSM1Q2NKQ1 1148 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 PIK3R6Q5UE93 754 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 CLEC14AQ86T13 490 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 PIGZQ86VD9 579 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 MMAAQ8IVH4 418 aaKnown RBP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 NELFCDQ8IXH7 590 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 CALR3Q96L12 384 aaKnown RBP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 SLC46A1Q96NT5 459 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 DEPDC7Q96QD5 511 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 NT5C1AQ9BXI3 368 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 UBXN6Q9BZV1 441 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 GPR27Q9NS67 375 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
PRKCH-218ENST00000555628 CYTH4Q9UIA0 394 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 NCKAP1Q9Y2A7 1128 aa9.43□□□□□ -0.9
PRKCH-218ENST00000555628 TTC34A8MYJ7 566 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 TULP2O00295 520 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 SUV39H1O43463 412 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 PHACTR2O75167 634 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 NTRK1P04629 796 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 P4HA1P13674 534 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 SLC8A1P32418 973 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 TXLNAP40222 546 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 CSKP41240 450 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 PDX1P52945 283 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 ISXQ2M1V0 245 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 NADSYN1Q6IA69 706 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 MSANTD2Q6P1R3 559 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 TRIM69Q86WT6 500 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 ARHGAP18Q8N392 663 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 FIBINQ8TAL6 211 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 NDRG1Q92597 394 aaKnown RBP9.42□□□□□ -0.9
PRKCH-218ENST00000555628 PTPRN2Q92932 1015 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 TMA16Q96EY4 203 aaKnown RBP9.42□□□□□ -0.9
PRKCH-218ENST00000555628 PANK2Q9BZ23 570 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 NUCKS1Q9H1E3 243 aaKnown RBP9.42□□□□□ -0.9
PRKCH-218ENST00000555628 RUBCNLQ9H714 662 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 CYP3A43Q9HB55 503 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 THSD1Q9NS62 852 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 STRIP2Q9ULQ0 834 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 PCDHGA8Q9Y5G5 932 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 TDRD6O60522 2096 aaKnown RBP9.42□□□□□ -0.9
PRKCH-218ENST00000555628 LRBAP50851 2863 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 SCN8AQ9UQD0 1980 aa9.42□□□□□ -0.9
PRKCH-218ENST00000555628 A0A1B0GTH6 734 aa9.41□□□□□ -0.9
PRKCH-218ENST00000555628 TARSL2A2RTX5 802 aaKnown RBP9.41□□□□□ -0.9
PRKCH-218ENST00000555628 MSI1O43347 362 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms