RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 NRF1Q16656 503 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 SCUBE3Q8IX30 993 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 STON2Q8WXE9 905 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 AGAP3Q96P47 875 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 NT5C1AQ9BXI3 368 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 TBCCD1Q9NVR7 557 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 VTI1BQ9UEU0 232 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 CDYLQ9Y232 598 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 MYRFQ9Y2G1 1151 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 A0A1B0GTW7 788 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 SLCO1B7G3V0H7 640 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 STX16-NPEPL1H3BU86 382 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 TRIM38O00635 465 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 B4GALT5O43286 388 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 GAS2O43903 313 aaKnown RBP23.57■■□□□ 1.36
NPAS3-206ENST00000548645 LTFP02788 710 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 BBS5Q8N3I7 341 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 LRRC71Q8N4P6 559 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 AFG1LQ8WV93 481 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 CNKSR2Q8WXI2 1034 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 LGMNQ99538 433 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 ZBTB26Q9HCK0 441 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 SCAF8Q9UPN6 1271 aaKnown RBP23.57■■□□□ 1.36
NPAS3-206ENST00000548645 RNF103O00237 685 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 ATP6V1G1O75348 118 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 APOA4P06727 396 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TFEBP19484 476 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 IRF9Q00978 393 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 EN1Q05925 392 aaPredicted RBP23.56■■□□□ 1.36
NPAS3-206ENST00000548645 PRKAA1Q13131 559 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 IL23RQ5VWK5 629 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 NXNQ6DKJ4 435 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TTC39CQ8N584 583 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 CXorf38Q8TB03 319 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 URGCPQ8TCY9 931 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 SNRNP27Q8WVK2 155 aaKnown RBP23.56■■□□□ 1.36
NPAS3-206ENST00000548645 HSPBAP1Q96EW2 488 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 PHF12Q96QT6 1004 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 KCTD15Q96SI1 283 aaPredicted RBP23.56■■□□□ 1.36
NPAS3-206ENST00000548645 MYO18AQ92614 2054 aaKnown RBP23.56■■□□□ 1.36
NPAS3-206ENST00000548645 C7orf72A4D263 438 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 VAPBO95292 243 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TMEM132BQ14DG7 1078 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TMA16Q96EY4 203 aaKnown RBP23.56■■□□□ 1.36
NPAS3-206ENST00000548645 FAM167AQ96KS9 214 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TEX13BQ9BXU2 312 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 FZD8Q9H461 694 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 COQ10BQ9H8M1 238 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 GTF2IRD1Q9UHL9 959 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 AP4S1Q9Y587 144 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 PTPRFP10586 1907 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 COQ9O75208 318 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 PIGNO95427 931 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 C2P06681 752 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TFE3P19532 575 aaPredicted RBP23.56■■□□□ 1.36
NPAS3-206ENST00000548645 UBA1P22314 1058 aaKnown RBP23.56■■□□□ 1.36
NPAS3-206ENST00000548645 PTPN9P43378 593 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 SNX16P57768 344 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TUBA4AP68366 448 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 PTK2BQ14289 1009 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 KRT80Q6KB66 452 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 DHRS4L2Q6PKH6 230 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TMEM110Q86TL2 294 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 C12orf29Q8N999 325 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 SLC7A14Q8TBB6 771 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 ADAM32Q8TC27 787 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 TMIGD2Q96BF3 282 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 CAAP1Q9H8G2 361 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 LRRC40Q9H9A6 602 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 PLGRKTQ9HBL7 147 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 RRN3Q9NYV6 651 aa23.56■■□□□ 1.36
NPAS3-206ENST00000548645 H3BNH8 94 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 MAGEB3O15480 346 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 GRID2O43424 1007 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 FARP2O94887 1054 aaPredicted RBP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 PTPN1P18031 435 aaKnown RBP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 TCN1P20061 433 aaPredicted RBP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 PSMB4P28070 264 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 PRKAA2P54646 552 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 CARM1Q86X55 608 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 ATP6V1E2Q96A05 226 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 ASB9Q96DX5 294 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 FCRL3Q96P31 734 aaPredicted RBP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 MAGEB5Q9BZ81 275 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 MRPL40Q9NQ50 206 aaKnown RBP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 PNPLA3Q9NST1 481 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 XPO1O14980 1071 aaKnown RBP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 NUP107P57740 925 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 IKBKEQ14164 716 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 LIPMQ5VYY2 423 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 RDH11Q8TC12 318 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 ZNF669Q96BR6 464 aaPredicted RBP23.55■■□□□ 1.36
NPAS3-206ENST00000548645 CAB39LQ9H9S4 337 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 TNFSF13BQ9Y275 285 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 MFHAS1Q9Y4C4 1052 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 MGAMO43451 1857 aa23.55■■□□□ 1.36
NPAS3-206ENST00000548645 WNT10BO00744 389 aa23.54■■□□□ 1.36
NPAS3-206ENST00000548645 PAPSS1O43252 624 aaPredicted RBP23.54■■□□□ 1.36
NPAS3-206ENST00000548645 GRIA4P48058 902 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms