RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 DKK1O94907 266 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 ADH1BP00325 375 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 ERCC5P28715 1186 aaPredicted RBP12.4□□□□□ -0.42
PTPN6-220ENST00000543115 NNMTP40261 264 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 GABRB2P47870 512 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 CXCR3P49682 368 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 SULT1E1P49888 294 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 CCT8P50990 548 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
PTPN6-220ENST00000543115 SULT2A1Q06520 285 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 SFSWAPQ12872 951 aaKnown RBP12.4□□□□□ -0.42
PTPN6-220ENST00000543115 ALFQ53S48 1182 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 ARTNQ5T4W7 220 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 KLHDC7AQ5VTJ3 777 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 TRNP1Q6NT89 227 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.4□□□□□ -0.42
PTPN6-220ENST00000543115 Q6ZVU0 165 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTPN6-220ENST00000543115 ZNF683Q8IZ20 524 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 TMEM35BQ8NCS4 154 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 NT5C3BQ969T7 300 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 FAM131CQ96AQ9 280 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 SPAG5Q96R06 1193 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 NAA15Q9BXJ9 866 aaKnown RBP12.4□□□□□ -0.42
PTPN6-220ENST00000543115 ACE2Q9BYF1 805 aaPredicted RBP12.4□□□□□ -0.42
PTPN6-220ENST00000543115 TKTL2Q9H0I9 626 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 ARHGEF38Q9NXL2 777 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 TBC1D30Q9Y2I9 924 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 CACNA1EQ15878 2313 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 PLXNA2O75051 1894 aa12.4□□□□□ -0.42
PTPN6-220ENST00000543115 CEP295Q9C0D2 2601 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 A0A1B0GTQ1 180 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 A0A1W2PR77 199 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 PCDHGA12O60330 932 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 RTN2O75298 545 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 CLDN11O75508 207 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 MT-CO1P00395 513 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 UCHL3P15374 230 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 FLT3P36888 993 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 CCR5P51681 352 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 CDH4P55283 916 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 OXCT1P55809 520 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 C21orf59P57076 290 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 BPIFB4P59827 614 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 SCAPQ12770 1279 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 ZNF177Q13360 481 aaPredicted RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 SUZ12Q15022 739 aaKnown RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 SHBQ15464 509 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 DLG2Q15700 870 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 POM121L1PQ3SYA9 428 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 ACCSLQ4AC99 568 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 CCNI2Q6ZMN8 369 aaPredicted RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 NOP9Q86U38 636 aaKnown RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 XYLT1Q86Y38 959 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 MARCH9Q86YJ5 346 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 ZDHHC17Q8IUH5 632 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 SH2D3CQ8N5H7 860 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 TBCBQ99426 244 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 PSMB7Q99436 277 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 CDC6Q99741 560 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 NUP62CLQ9H1M0 184 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 PDCL3Q9H2J4 239 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 WDCPQ9H6R7 721 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 AASDHPPTQ9NRN7 309 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 ARHGAP20Q9P2F6 1191 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 SLC25A13Q9UJS0 675 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 VPS28Q9UK41 221 aa12.39□□□□□ -0.43
PTPN6-220ENST00000543115 NYNRINQ9P2P1 1898 aaKnown RBP12.39□□□□□ -0.43
PTPN6-220ENST00000543115 CFAP47Q6ZTR5 3102 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TMEM131Q92545 1883 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TBC1D3DA0A087WVF3 549 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TBC1D3IA0A087WXS9 549 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TBC1D3EA0A087X179 549 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TBC1D3KA0A087X1G2 549 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TBC1D3FA6NER0 549 aaPredicted RBP12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TBC1D3LB9A6J9 549 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 K7ERQ8 282 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 RNF103O00237 685 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 PES1O00541 588 aaKnown RBP12.38□□□□□ -0.43
PTPN6-220ENST00000543115 LATO43561 262 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 BNIP3LO60238 219 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 SNAP91O60641 907 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 MMEP08473 750 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TBC1D3HP0C7X1 549 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 SRCP12931 536 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 CD38P28907 300 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 GRK6P43250 576 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 SNX16P57768 344 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 DEUP1Q05D60 604 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 CNTN1Q12860 1018 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 MTA1Q13330 715 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 TCP11X2Q5H9J9 407 aa12.38□□□□□ -0.43
PTPN6-220ENST00000543115 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms