RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 KCTD11Q693B1 232 aa14.63□□□□□ -0.07
USP44-203ENST00000537435 NAIF1Q69YI7 327 aaPredicted RBP14.63□□□□□ -0.07
USP44-203ENST00000537435 PGM2L1Q6PCE3 622 aa14.63□□□□□ -0.07
USP44-203ENST00000537435 ACTRT2Q8TDY3 377 aa14.63□□□□□ -0.07
USP44-203ENST00000537435 NTAN1Q96AB6 310 aa14.63□□□□□ -0.07
USP44-203ENST00000537435 CCDC124Q96CT7 223 aaKnown RBP14.63□□□□□ -0.07
USP44-203ENST00000537435 MAN1C1Q9NR34 630 aa14.63□□□□□ -0.07
USP44-203ENST00000537435 CDH22Q9UJ99 828 aa14.63□□□□□ -0.07
USP44-203ENST00000537435 PLXNB2O15031 1838 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 PCNTO95613 3336 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 E9PBE3 544 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
USP44-203ENST00000537435 KLHL41O60662 606 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 F2P00734 622 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 C2P06681 752 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 ITGAXP20702 1163 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 YY1P25490 414 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 DAOAP59103 153 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 ZBTB17Q13105 803 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 MPP3Q13368 585 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 CUL3Q13618 768 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 SLC9B1Q4ZJI4 515 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 LDLRAD1Q5T700 205 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 EPGNQ6UW88 154 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 FRMD7Q6ZUT3 714 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 RAPH1Q70E73 1250 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 CTU1Q7Z7A3 348 aaKnown RBP14.62□□□□□ -0.07
USP44-203ENST00000537435 CLEC14AQ86T13 490 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 KCNMB4Q86W47 210 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 DEFB107AQ8IZN7 70 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 SMG8Q8ND04 991 aaKnown RBP14.62□□□□□ -0.07
USP44-203ENST00000537435 URGCPQ8TCY9 931 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 SLC26A7Q8TE54 656 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 GBA3Q9H227 469 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 CACNG4Q9UBN1 327 aa14.62□□□□□ -0.07
USP44-203ENST00000537435 BTBD19C9JJ37 291 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 ZBTB14O43829 449 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 ZMPSTE24O75844 475 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 UBTFL6P0CB48 400 aaPredicted RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 NCAM1P13591 858 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 NFKB1P19838 968 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 PSEN1P49768 467 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 AIF1P55008 147 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 BTKQ06187 659 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 SCAPQ12770 1279 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 CCNIQ14094 377 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 ADGRG6Q86SQ4 1221 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 PHC3Q8NDX5 983 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 ACVR1CQ8NER5 493 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 AGR3Q8TD06 166 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 MAPK15Q8TD08 544 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 TSPAN18Q96SJ8 248 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 CHRAC1Q9NRG0 131 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 IARS2Q9NSE4 1012 aaKnown RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 C20orf96Q9NUD7 363 aaPredicted RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 FBXW11Q9UKB1 542 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 ASB3Q9Y575 518 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 RAD54BQ9Y620 910 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 ZNF638Q14966 1978 aaKnown RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 GABRDO14764 452 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 NCAM2O15394 837 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 TRIM13O60858 407 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 SMIM24O75264 130 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 TPH1P17752 444 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 FRG1Q14331 258 aaKnown RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 GRB14Q14449 540 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 FSCBQ5H9T9 825 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 RNF111Q6ZNA4 994 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 GPRIN1Q7Z2K8 1008 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 DHDDSQ86SQ9 333 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 EFCAB3Q8N7B9 438 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 NPLOC4Q8TAT6 608 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 HDAC11Q96DB2 347 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 IFT43Q96FT9 208 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 ZFP42Q96MM3 310 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 NR1H4Q96RI1 486 aaPredicted RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 NMRAL1Q9HBL8 299 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 CRTAC1Q9NQ79 661 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 DDIT4Q9NX09 232 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 CPSF2Q9P2I0 782 aaKnown RBP14.61□□□□□ -0.07
USP44-203ENST00000537435 SNX10Q9Y5X0 201 aa14.61□□□□□ -0.07
USP44-203ENST00000537435 TMEM114B3SHH9 223 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 GOLGA8TH3BQL2 631 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 PTGESO14684 152 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 TREHO43280 583 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 ZNF189O75820 626 aaPredicted RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 FBXO21O94952 628 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 LTFP02788 710 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 COX4I1P13073 169 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 LRPAP1P30533 357 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 IRX1P78414 480 aaPredicted RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 ASPHQ12797 758 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 MFSD10Q14728 455 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 PRAMEF19Q5SWL8 479 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 TDRD5Q8NAT2 981 aaKnown RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 SREK1Q8WXA9 508 aaKnown RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 VPS39Q96JC1 886 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 KCNK16Q96T55 309 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 TSC22D3Q99576 134 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms