RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CCR5P51681 352 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 TBX4P57082 545 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 NXPH1P58417 271 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 ST8SIA6P61647 398 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 BNIP3Q12983 259 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 PIK3R6Q5UE93 754 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 PRICKLE2Q7Z3G6 844 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 FAM114A1Q8IWE2 563 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 ZNF557Q8N988 423 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 CLEC4CQ8WTT0 213 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 SNRNP27Q8WVK2 155 aaKnown RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 SHC3Q92529 594 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 TTC9Q92623 222 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 OMDQ99983 421 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 DDX50Q9BQ39 737 aaKnown RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 CRACR2AQ9BSW2 395 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 MIS12Q9H081 205 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 THSD1Q9NS62 852 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 ABCB8Q9NUT2 735 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 UNC79Q9P2D8 2635 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 APEX2Q9UBZ4 518 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 DACH1Q9UI36 760 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 GGA2Q9UJY4 613 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 FZD4Q9ULV1 537 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 TLR6Q9Y2C9 796 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 HEMK1Q9Y5R4 338 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 FLNCQ14315 2725 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
CPSF1-203ENST00000527916 A0A1W2PR77 199 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 BECN2A8MW95 431 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 PIK3R2O00459 728 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 MSI1O43347 362 aaKnown RBP10.87□□□□□ -0.67
CPSF1-203ENST00000527916 ACSL4O60488 711 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 RNASEH2AO75792 299 aaKnown RBP10.87□□□□□ -0.67
CPSF1-203ENST00000527916 CALCAP01258 141 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 NTRK1P04629 796 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 MPOP05164 745 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 PABPC1P11940 636 aaKnown RBP10.87□□□□□ -0.67
CPSF1-203ENST00000527916 MTIF2P46199 727 aaKnown RBP10.87□□□□□ -0.67
CPSF1-203ENST00000527916 LSSP48449 732 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 GABREP78334 506 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 DAB2P98082 770 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 ZNF211Q13398 564 aaPredicted RBP10.87□□□□□ -0.67
CPSF1-203ENST00000527916 MAN2A1Q16706 1144 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 TPD52L1Q16890 204 aaPredicted RBP10.87□□□□□ -0.67
CPSF1-203ENST00000527916 PROX2Q3B8N5 592 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 MBLAC2Q68D91 279 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 DENND1BQ6P3S1 775 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 ADIPOR2Q86V24 386 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 CREBRFQ8IUR6 639 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 MFSD2AQ8NA29 543 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 SLC39A13Q96H72 371 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 SERPINB11Q96P15 392 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 DEPDC7Q96QD5 511 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 FAM117AQ9C073 453 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 POPDC2Q9HBU9 364 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 ST7Q9NRC1 585 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 IL17BQ9UHF5 180 aa10.87□□□□□ -0.67
CPSF1-203ENST00000527916 SPTAN1Q13813 2472 aaKnown RBP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 LRRK2Q5S007 2527 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 A0A1W2PP55 124 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 MID1O15344 667 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 THAP12O43422 761 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 IGLV3-25P01717 112 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 GLI1P08151 1106 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 SNX16P57768 344 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 YWHAZP63104 245 aaKnown RBP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 PTK2Q05397 1052 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 SRSF1Q07955 248 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 OVGP1Q12889 678 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 EIF4EBP2Q13542 120 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 KCNJ12Q14500 433 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 CST6Q15828 149 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 FAM133BQ5BKY9 247 aaKnown RBP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 GJB7Q6PEY0 223 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 SND1Q7KZF4 910 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 WDTC1Q8N5D0 677 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 FIBINQ8TAL6 211 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 DQX1Q8TE96 717 aaKnown RBP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 FAM149B1Q96BN6 582 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 CCDC97Q96F63 343 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 FCRL2Q96LA5 508 aaPredicted RBP10.86□□□□□ -0.67
CPSF1-203ENST00000527916 TUBGCP2Q9BSJ2 902 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 NUP62CLQ9H1M0 184 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 NEUROG2Q9H2A3 272 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 NDST4Q9H3R1 872 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 POLR1BQ9H9Y6 1135 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 EBF2Q9HAK2 575 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 SIX2Q9NPC8 291 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 ASNSD1Q9NWL6 643 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 CYTH4Q9UIA0 394 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 NAALADL1Q9UQQ1 740 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 PCDHB1Q9Y5F3 818 aa10.86□□□□□ -0.67
CPSF1-203ENST00000527916 E5RJQ4 531 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 FOXN3O00409 490 aaPredicted RBP10.85□□□□□ -0.67
CPSF1-203ENST00000527916 SIGLEC6O43699 453 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 TBL1XO60907 577 aa10.85□□□□□ -0.67
CPSF1-203ENST00000527916 USP12O75317 370 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms