RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 EXOC8Q8IYI6 725 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 SPATA3Q8NHX4 192 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ITFG1Q8TB96 612 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 LNX1Q8TBB1 728 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 CSGALNACT1Q8TDX6 532 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 WASF1Q92558 559 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 MCRS1Q96EZ8 462 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF778Q96MU6 729 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 CLSTN3Q9BQT9 956 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 JPH2Q9BR39 696 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 EDEM2Q9BV94 578 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 GLT8D2Q9H1C3 349 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 TRPV4Q9HBA0 871 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 MARCH5Q9NX47 278 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 DNMT3BQ9UBC3 853 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 DKK4Q9UBT3 224 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 SEC63Q9UGP8 760 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ADAM28Q9UKQ2 775 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 PCDHA9Q9Y5H5 950 aa4.04□□□□□ -1.76
PDLIM5-218ENST00000513341 ASXL3Q9C0F0 2248 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 USP9XQ93008 2570 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 A0A087WZ62 844 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 A0A0D9SFI3 127 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 ARHGEF37A1IGU5 675 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 MYBPHLA2RUH7 354 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 MARCH11A6NNE9 402 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 IPO5O00410 1097 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CHADO15335 359 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 TADA2AO75478 443 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CRTAMO95727 393 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 POMCP01189 267 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 ASLP04424 464 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CYP3A4P08684 503 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 MYBP10242 640 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CCNE1P24864 410 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 AXLP30530 894 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 GDI1P31150 447 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 IGFALSP35858 605 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 DPP6P42658 865 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CLCN3P51790 818 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 NTHL1P78549 312 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 SCAPQ12770 1279 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 ELAVL2Q12926 359 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 TRDNQ13061 729 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 MRPL49Q13405 166 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 SART3Q15020 963 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 FAM78AQ5JUQ0 283 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 SPDYCQ5MJ68 293 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 TSHZ3Q63HK5 1081 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 SLFN12LQ6IEE8 588 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF425Q6IV72 752 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 FUT10Q6P4F1 479 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 C19orf48Q6RUI8 117 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CATSPER4Q7RTX7 472 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 SRGAP1Q7Z6B7 1085 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CATIPQ7Z7H3 387 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 PIP4P1Q86T03 277 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 HACE1Q8IYU2 909 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 TMTC2Q8N394 836 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CISD2Q8N5K1 135 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 LEMD2Q8NC56 503 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CPEB3Q8NE35 698 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 CTCFLQ8NI51 663 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 SMARCD2Q92925 531 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 MFSD3Q96ES6 412 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 FAM227BQ96M60 508 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 SCLT1Q96NL6 688 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 FDXACB1Q9BRP7 624 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 PITHD1Q9GZP4 211 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 TRIM39Q9HCM9 518 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 ACSS2Q9NR19 701 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 AGPAT5Q9NUQ2 364 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 TCEAL9Q9UHQ7 104 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 EVLQ9UI08 416 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 KLK13Q9UKR3 277 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 MAFFQ9ULX9 164 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 PIN4Q9Y237 131 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 PRG3Q9Y2Y8 225 aaPredicted RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 RAI2Q9Y5P3 530 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 NUP205Q92621 2012 aa4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 URB1O60287 2271 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 TDRD15B5MCY1 1934 aaKnown RBP4.03□□□□□ -1.76
PDLIM5-218ENST00000513341 PDCD11Q14690 1871 aaKnown RBP4.03□□□□□ -1.77
PDLIM5-218ENST00000513341 ACACAQ13085 2346 aa4.03□□□□□ -1.77
PDLIM5-218ENST00000513341 ZMYM2Q9UBW7 1377 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CFAP46Q8IYW2 2715 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ASCC3Q8N3C0 2202 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SF3B1O75533 1304 aaKnown RBP eCLIP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SALL3Q9BXA9 1300 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 SPTA1P02549 2419 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 TICRRQ7Z2Z1 1910 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 A0A087WV48 116 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 LNP1A1A4G5 178 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 ARL5CA6NH57 179 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 hCG_1984214I3L0E3 225 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 J3QKU1 62 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 HIP1O00291 1037 aa4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 IFIT3O14879 490 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 PPP1R12AO14974 1030 aaPredicted RBP4.02□□□□□ -1.77
PDLIM5-218ENST00000513341 CCL16O15467 120 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms