RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZPBP2Q6X784 338 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 C4orf50Q6ZRC1 276 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 Q6ZSR6 202 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 CHST9Q7L1S5 443 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 SPRED1Q7Z699 444 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 CCNJLQ8IV13 435 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 SFTPA2Q8IWL1 248 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 NLGN4XQ8N0W4 816 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM86AQ8N2M4 240 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 CPXM2Q8N436 756 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 CISD2Q8N5K1 135 aaKnown RBP3.48□□□□□ -1.85
TCOF1-208ENST00000506063 RCBTB1Q8NDN9 531 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM161BQ8NDZ6 487 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 PDZD8Q8NEN9 1154 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 CCDC148Q8NFR7 591 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 NLGN4YQ8NFZ3 816 aaPredicted RBP3.48□□□□□ -1.85
TCOF1-208ENST00000506063 LMX1AQ8TE12 382 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 NUDT8Q8WV74 236 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 UBE2Q2Q8WVN8 375 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 KIFAP3Q92845 792 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 KLK6Q92876 244 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 KCNN1Q92952 543 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 FBXO32Q969P5 355 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 RELTQ969Z4 430 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 RTP4Q96DX8 246 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 IFT74Q96LB3 600 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 TCEANC2Q96MN5 208 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 KCNK16Q96T55 309 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 OMDQ99983 421 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 SYT15Q9BQS2 421 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 NTPCRQ9BSD7 190 aaKnown RBP3.48□□□□□ -1.85
TCOF1-208ENST00000506063 LRRC61Q9BV99 259 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 CALN1Q9BXU9 219 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 C22orf23Q9BZE7 217 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 ZNF518BQ9C0D4 1074 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 OSBPL3Q9H4L5 887 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 CHST11Q9NPF2 352 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 ANO2Q9NQ90 1003 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 SH3GLB2Q9NR46 395 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 GDAP2Q9NXN4 497 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 DPP3Q9NY33 737 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 EHD2Q9NZN4 543 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 MAGEC2Q9UBF1 373 aaPredicted RBP3.48□□□□□ -1.85
TCOF1-208ENST00000506063 TNFRSF10DQ9UBN6 386 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 GGT7Q9UJ14 662 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 APPL1Q9UKG1 709 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 INTS6Q9UL03 887 aaKnown RBP3.48□□□□□ -1.85
TCOF1-208ENST00000506063 SARDHQ9UL12 918 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 ZFR2Q9UPR6 939 aaKnown RBP3.48□□□□□ -1.85
TCOF1-208ENST00000506063 ZNF281Q9Y2X9 895 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 DERAQ9Y315 318 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 C2CD2Q9Y426 696 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 ANKRD36A6QL64 1941 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 PCM1Q15154 2024 aa3.48□□□□□ -1.85
TCOF1-208ENST00000506063 ITIH6Q6UXX5 1313 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 A0A0B4J269 797 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 IGHV5-10-1A0A0J9YXX1 117 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CCDC169A6NNP5 214 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 RNF212BA8MTL3 300 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CLDN5O00501 218 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 HGSO14964 777 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 OGTO15294 1046 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 RAD51BO15315 384 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SLC16A4O15374 487 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SLC7A4O43246 635 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 RTN3O95197 1032 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 MAPTP10636 758 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PABPC1P11940 636 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 JUNDP17535 347 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PLCG1P19174 1290 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CHMLP26374 656 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ANXA13P27216 316 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 MAP4P27816 1152 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 MZF1P28698 734 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PCSK1P29120 753 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PCSK6P29122 969 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CD70P32970 193 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 RPIAP49247 311 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SGSHP51688 502 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 COPB1P53618 953 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SLC5A3P53794 718 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 RCAN1P53805 252 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ADKP55263 362 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PPP2R2AP63151 447 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 B4GALNT1Q00973 533 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 MC1RQ01726 317 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 EXOSC10Q01780 885 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CYP27A1Q02318 531 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CDK18Q07002 472 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 DPYDQ12882 1025 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 IFRD2Q12894 506 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CHAF1BQ13112 559 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 C1orf61Q13536 156 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 LAMB3Q13751 1172 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ERV3-1Q14264 604 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SV2CQ496J9 727 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM259Q4ZIN3 620 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM164Q5U3C3 297 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 MBLAC2Q68D91 279 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ANKS6Q68DC2 871 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms