RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	CHRNA5	P30532	468 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	MMP13	P45452	471 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	CCR5	P51681	352 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	ARHGAP8	P85298	464 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	TRIP6	Q15654	476 aa	Known RBP	6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	MIDN	Q504T8	468 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	COLEC12	Q5KU26	742 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	ATG16L1	Q676U5	607 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	TMEM217	Q8N7C4	229 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	TUBB6	Q9BUF5	446 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	STN1	Q9H668	368 aa	Known RBP	6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	GGA3	Q9NZ52	723 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	SUFU	Q9UMX1	484 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	GDA	Q9Y2T3	454 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	ZNF804B	A4D1E1	1349 aa		6.24	□□□□□ -1.41
TRA2A-210	ENST00000497730	WDR91	A4D1P6	747 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	DHX16	O60231	1041 aa	Known RBP	6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	TLR2	O60603	784 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	WNT1	P04628	370 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	CYP2J2	P51589	502 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	RHAG	Q02094	409 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	CHRND	Q07001	517 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	BYSL	Q13895	437 aa	Known RBP	6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	AP5B1	Q2VPB7	878 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	FAM171A1	Q5VUB5	890 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	SHC4	Q6S5L8	630 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	CCDC25	Q86WR0	208 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	ZNF575	Q86XF7	245 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	WIPF2	Q8TF74	440 aa	Predicted RBP	6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	RNFT2	Q96EX2	444 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	ZNF419	Q96HQ0	510 aa	Predicted RBP	6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	CADM1	Q9BY67	442 aa	Known RBP	6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730		Q9N2J8	555 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	UPB1	Q9UBR1	384 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	LAMP3	Q9UQV4	416 aa		6.23	□□□□□ -1.41
TRA2A-210	ENST00000497730	KIR2DS5	A0A0G2JLQ3	304 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	KIR2DS3	K7RE56	304 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	AGR2	O95994	175 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	HLA-DQA2	P01906	255 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	KLRC2	P26717	231 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	PMPCA	Q10713	525 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	SH2D4B	Q5SQS7	431 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	DEF8	Q6ZN54	512 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	BBS12	Q6ZW61	710 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	B4GALNT4	Q76KP1	1039 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	DDIAS	Q8IXT1	998 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	EME1	Q96AY2	570 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	EIF2AK1	Q9BQI3	630 aa	Known RBP	6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	FRMD8	Q9BZ67	464 aa	Predicted RBP	6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	ZNF304	Q9HCX3	659 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	AGO2	Q9UKV8	859 aa	Known RBP	6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	BTBD3	Q9Y2F9	522 aa		6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	6.22	□□□□□ -1.41
TRA2A-210	ENST00000497730	TRBV5-3	A0A0A0MS03	114 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	PRPF4	O43172	522 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	STRN	O43815	780 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	FCGR2A	P12318	317 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	PRKCH	P24723	683 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	SSBP2	P81877	361 aa	Predicted RBP	6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	TLE2	Q04725	743 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	TRPC3	Q13507	836 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	KLF9	Q13886	244 aa	Predicted RBP	6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	SEMA3A	Q14563	771 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	IL13RA2	Q14627	380 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	C5orf22	Q49AR2	442 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	ALF	Q53S48	1182 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	C10orf25	Q5T742	122 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	ISM2	Q6H9L7	571 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	HMBOX1	Q6NT76	420 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	NANOGP1	Q8N7R0	232 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	DENND1A	Q8TEH3	1009 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	NCSTN	Q92542	709 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	IFT27	Q9BW83	186 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	GPR63	Q9BZJ6	419 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	MROH8	Q9H579	483 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	IL21R	Q9HBE5	538 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	TMEM160	Q9NX00	188 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	TUBA8	Q9NY65	449 aa	Predicted RBP	6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	IFT80	Q9P2H3	777 aa	Predicted RBP	6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	CD207	Q9UJ71	328 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	CRYL1	Q9Y2S2	319 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	AFG3L2	Q9Y4W6	797 aa		6.21	□□□□□ -1.42
TRA2A-210	ENST00000497730	DNAJC9-AS1	A6NH13	148 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	FOXO6	A8MYZ6	492 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	OVOL3	O00110	214 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	NEURL1	O76050	574 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	RABEP1	Q15276	862 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	ETFDH	Q16134	617 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	SMTNL2	Q2TAL5	461 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	ALG10	Q5BKT4	473 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	ALG10B	Q5I7T1	473 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	WDR45B	Q5MNZ6	344 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	TTC39A	Q5SRH9	613 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	TMTC1	Q8IUR5	882 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	SCAI	Q8N9R8	606 aa		6.2	□□□□□ -1.42
TRA2A-210	ENST00000497730	SLC44A5	Q8NCS7	719 aa		6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms