RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 IGHV4-34P06331 123 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 SRPRAP08240 638 aaKnown RBP12.97□□□□□ -0.33
HSPG2-212ENST00000493940 CD59P13987 128 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 CDK11BP21127 795 aaKnown RBP12.97□□□□□ -0.33
HSPG2-212ENST00000493940 OXTRP30559 389 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-212ENST00000493940 CLEC16AQ2KHT3 1053 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 BRMS1LQ5PSV4 323 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 PIP4P1Q86T03 277 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 MINDY1Q8N5J2 469 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 KDM1BQ8NB78 822 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 BIRC7Q96CA5 298 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 PCMTD1Q96MG8 357 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-212ENST00000493940 CAMK1GQ96NX5 476 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 SPAG5Q96R06 1193 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 MIR1-1HGQ9H1L0 117 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 PABPC3Q9H361 631 aaKnown RBP12.97□□□□□ -0.33
HSPG2-212ENST00000493940 RRN3Q9NYV6 651 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 ACTL7AQ9Y615 435 aa12.97□□□□□ -0.33
HSPG2-212ENST00000493940 E9PAM4 449 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 KCNK3O14649 394 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 SMAD6O43541 496 aaKnown RBP12.96□□□□□ -0.33
HSPG2-212ENST00000493940 SEMA4FO95754 770 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 DNTTP04053 509 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 SLC8A1P32418 973 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 HOXD12P35452 270 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 DRD3P35462 400 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 GALCP54803 685 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 SNX16P57768 344 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 ST8SIA6P61647 398 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 GRIK2Q13002 908 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 SEMA3BQ13214 749 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 SLC12A1Q13621 1099 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 CST6Q15828 149 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 CDO1Q16878 200 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 RABGAP1LQ5R372 815 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 ZNF776Q68DI1 518 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-212ENST00000493940 WDR59Q6PJI9 974 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 MON1BQ7L1V2 547 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 ARCQ7LC44 396 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 TFAP2DQ7Z6R9 452 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 ZNF557Q8N988 423 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-212ENST00000493940 OR7D4Q8NG98 312 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 CEP76Q8TAP6 659 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 CENPIQ92674 756 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-212ENST00000493940 FOXJ1Q92949 421 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 C1orf74Q96LT6 269 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 AGPAT1Q99943 283 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 BPIFA3Q9BQP9 254 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 STAP1Q9ULZ2 295 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 WASF3Q9UPY6 502 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 NEU3Q9UQ49 428 aa12.96□□□□□ -0.33
HSPG2-212ENST00000493940 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-212ENST00000493940 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 EDDM13A0A1B0GTR0 161 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 TARSL2A2RTX5 802 aaKnown RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 MEI4A8MW99 385 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 ATP9BO43861 1147 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 SRGAP2O75044 1071 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 CLDN11O75508 207 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 ZNF821O75541 412 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 CD160O95971 181 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 F9P00740 461 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 CTSLP07711 333 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 SRCP12931 536 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 CSNK1EP49674 416 aaKnown RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 NOVA1P51513 510 aaKnown RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 CDH4P55283 916 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 HDAC4P56524 1084 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 RPL7AP62424 266 aaKnown RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 OGDHQ02218 1023 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 GFPT1Q06210 699 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 ZNF177Q13360 481 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 E2F5Q15329 346 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 DLG2Q15700 870 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 SYCP2LQ5T4T6 812 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 MANEALQ5VSG8 457 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 TTC39BQ5VTQ0 682 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 DAB2IPQ5VWQ8 1189 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 LINGO4Q6UY18 593 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 PHF13Q86YI8 300 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-212ENST00000493940 PYROXD2Q8N2H3 581 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 SH2D3CQ8N5H7 860 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 CCDC185Q8N715 623 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 VOPP1Q96AW1 172 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 ADAM22Q9P0K1 906 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 VPS51Q9UID3 782 aa12.95□□□□□ -0.34
HSPG2-212ENST00000493940 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 A0A1B0GTW7 788 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 A0A1B0GVT2 93 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 BCAT2O15382 392 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-212ENST00000493940 ZMPSTE24O75844 475 aa12.94□□□□□ -0.34
HSPG2-212ENST00000493940 FSBPO95073 299 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms