RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 OVGP1Q12889 678 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 DNAJC3Q13217 504 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 MTA1Q13330 715 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 STAT4Q14765 748 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 SHBQ15464 509 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 ACCSLQ4AC99 568 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 TTI2Q6NXR4 508 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 DENND1BQ6P3S1 775 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 FOXR2Q6PJQ5 311 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 LRRC69Q6ZNQ3 347 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 ENOSF1Q7L5Y1 443 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 CCAR2Q8N163 923 aaKnown RBP9.65□□□□□ -0.86
SNX17-207ENST00000489402 MFSD2AQ8NA29 543 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 NELFBQ8WX92 580 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 KREMEN1Q96MU8 473 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 SLC4A5Q9BY07 1137 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 INTS2Q9H0H0 1204 aaKnown RBP9.65□□□□□ -0.86
SNX17-207ENST00000489402 KDM4CQ9H3R0 1056 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 ERVMER34-1Q9H9K5 563 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 CYTH4Q9UIA0 394 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 MAN1B1Q9UKM7 699 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 CNTN6Q9UQ52 1028 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 DMTF1Q9Y222 760 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.65□□□□□ -0.86
SNX17-207ENST00000489402 AK5Q9Y6K8 562 aa9.65□□□□□ -0.86
SNX17-207ENST00000489402 GOLGA4Q13439 2230 aaKnown RBP9.65□□□□□ -0.86
SNX17-207ENST00000489402 ACACAQ13085 2346 aa9.65□□□□□ -0.87
SNX17-207ENST00000489402 ATRXP46100 2492 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 GCN1Q92616 2671 aaKnown RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 SYNJ2BP-COX16A0A087WUM0 186 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 ALOX15BO15296 676 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 PLRG1O43660 514 aaKnown RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 RTN2O75298 545 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 IGLV3-25P01717 112 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 GLI1P08151 1106 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 VAV1P15498 845 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 GNA15P30679 374 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 MAT2AP31153 395 aaKnown RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 CCR1P32246 355 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 DRD3P35462 400 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 PLK1P53350 603 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 PPP2CBP62714 309 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 PPP2CAP67775 309 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 PDCLQ13371 301 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 ILKQ13418 452 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 SETMARQ53H47 684 aaPredicted RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 HS1BP3Q53T59 392 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 HES3Q5TGS1 186 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 TMEM110Q86TL2 294 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 IQCHQ86VS3 1027 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 TRIM69Q86WT6 500 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 TRIM59Q8IWR1 403 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 ELOA2Q8IYF1 753 aaPredicted RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 PIP4K2CQ8TBX8 421 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 ZNF606Q8WXB4 792 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 FAM81BQ96LP2 452 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 RPRD1AQ96P16 312 aaPredicted RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 BBC3Q96PG8 261 aaPredicted RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 UBE2TQ9NPD8 197 aaPredicted RBP9.64□□□□□ -0.87
SNX17-207ENST00000489402 DDIT4Q9NX09 232 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 COX16Q9P0S2 106 aa9.64□□□□□ -0.87
SNX17-207ENST00000489402 URB1O60287 2271 aaKnown RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 MYLKQ15746 1914 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 FAM170AA1A519 330 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 C10orf142B7Z368 130 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 PRAMEF26H0Y7S4 382 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 RNF103O00237 685 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 RRP8O43159 456 aaKnown RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 BNIP3LO60238 219 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 HSF2BPO75031 334 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 FGFR1OPO95684 399 aaKnown RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 CKMT2P17540 419 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 USP8P40818 1118 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 RXRGP48443 463 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 IRAK1P51617 712 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 MARSP56192 900 aaKnown RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 STX17P56962 302 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 SNX16P57768 344 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 SEMG2Q02383 582 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 CCDC15Q0P6D6 951 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 BNIP3Q12983 259 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 TARDBPQ13148 414 aaKnown RBP eCLIP9.63□□□□□ -0.87
SNX17-207ENST00000489402 PAK1Q13153 545 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 ZNF177Q13360 481 aaPredicted RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 TAF5Q15542 800 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 EFHC1Q5JVL4 640 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 SFMBT2Q5VUG0 894 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 CXorf57Q6NSI4 855 aaKnown RBP9.63□□□□□ -0.87
SNX17-207ENST00000489402 FBXL19Q6PCT2 694 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 GJB7Q6PEY0 223 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 FRS2Q8WU20 508 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 BAP1Q92560 729 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 TSC1Q92574 1164 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 FAM131CQ96AQ9 280 aa9.63□□□□□ -0.87
SNX17-207ENST00000489402 CCDC114Q96M63 670 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms