RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RBM47A0AV96 593 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 PLK4O00444 970 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NPC1O15118 1278 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 FARP2O94887 1054 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 ZBTB7AO95365 584 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PIGNO95427 931 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 BMP7P18075 431 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CYP3A7P24462 503 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 BMI1P35226 326 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ADD2P35612 726 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZNF81P51508 661 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CTDSPL2Q05D32 466 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SNTA1Q13424 505 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZNF605Q86T29 641 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ADHFE1Q8IWW8 467 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CD302Q8IX05 232 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 OR14K1Q8NGZ2 314 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 AGR3Q8TD06 166 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TESK2Q96S53 571 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZNF607Q96SK3 696 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZYG11BQ9C0D3 744 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CCDC8Q9H0W5 538 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 NOD2Q9HC29 1040 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CCNB1IP1Q9NPC3 277 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.51□□□□□ -1.53
USF3-202ENST00000478658 SLC9A8Q9Y2E8 581 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NESP48681 1621 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 AGAP5A6NIR3 686 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CCND1P24385 295 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MAGEA3P43357 314 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MAGEA9P43362 315 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NUDT2P50583 147 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 USF2Q15853 346 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 C6orf183Q5T699 404 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 C1orf94Q6P1W5 598 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TUBA3EQ6PEY2 450 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 FBXO38Q6PIJ6 1188 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PAMR1Q6UXH9 720 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MOB1BQ7L9L4 216 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SNX20Q7Z614 316 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SYVN1Q86TM6 617 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZNF677Q86XU0 584 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SLC44A2Q8IWA5 706 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 DCAF4Q8WV16 495 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PTCD2Q8WV60 388 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 DNAJB3Q8WWF6 145 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 RORBQ92753 470 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NSMCE3Q96MG7 304 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TMEM74Q96NL1 305 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 GPER1Q99527 375 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MLXQ9UH92 298 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZNF639Q9UID6 485 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MKLN1Q9UL63 735 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 GRID1Q9ULK0 1009 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZBTB12Q9Y330 459 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 CYP2D7A0A087X1C5 515 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 LRIT2A6NDA9 550 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CHL1O00533 1208 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SUPT20HL2P0C7V6 817 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ITGA4P13612 1032 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TRIM23P36406 574 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 KIR3DL1P43629 444 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 BOP1Q14137 746 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 FRG1Q14331 258 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 LSM12Q3MHD2 195 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 CYB5RLQ6IPT4 315 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ERO1BQ86YB8 467 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TBC1D21Q8IYX1 336 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ZNF567Q8N184 647 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 NXPE1Q8N323 547 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ALLCQ8N6M5 410 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 PABPC5Q96DU9 382 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SLC25A23Q9BV35 468 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 OSBPL3Q9H4L5 887 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 USP29Q9HBJ7 922 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 CHMP1AQ9HD42 196 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 GPRC5BQ9NZH0 403 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 SLC27A6Q9Y2P4 619 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ADGBQ8N7X0 1667 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 GNG14A0A1W2PPG7 69 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 FAM86C2PA6NEL3 165 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 RRN3P2A6NIE6 340 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 TPD52L2O43399 206 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 GLP2RO95838 553 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 IFNA21P01568 189 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 UMPSP11172 480 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 POLR2EP19388 210 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 NR2F2P24468 414 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ATXN1P54253 815 aaKnown RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 ATP6AP1LQ52LC2 224 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 MLIPQ5VWP3 458 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 ARHGAP11AQ6P4F7 1023 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 GLB1LQ6UWU2 654 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 BNC2Q6ZN30 1099 aaPredicted RBP5.51□□□□□ -1.53
USF3-202ENST00000478658 C1orf186Q6ZWK4 172 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 RNF180Q86T96 592 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 LAPTM4BQ86VI4 370 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 DSELQ8IZU8 1212 aa5.51□□□□□ -1.53
USF3-202ENST00000478658 POF1BQ8WVV4 589 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms