RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 UBA3Q8TBC4 463 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 TMA16Q96EY4 203 aaKnown RBP10.28□□□□□ -0.76
LINC02561-201ENST00000449457 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 HEXIM2Q96MH2 286 aaKnown RBP10.28□□□□□ -0.76
LINC02561-201ENST00000449457 NOX5Q96PH1 765 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 ASCL3Q9NQ33 180 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 CLIC5Q9NZA1 410 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 ADAMTS1Q9UHI8 967 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 SARDHQ9UL12 918 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 SPTA1P02549 2419 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 UBE4BO95155 1302 aa10.28□□□□□ -0.76
LINC02561-201ENST00000449457 TBC1D3DA0A087WVF3 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3IA0A087WXS9 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3EA0A087X179 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3KA0A087X1G2 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 LY6G6EA0A0G2JKS1 128 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3FA6NER0 549 aaPredicted RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 LRRC72A6NJI9 287 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3LB9A6J9 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 POLR2DO15514 142 aaKnown RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 IL1BP01584 269 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 NR3C1P04150 777 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3HP0C7X1 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 P4HA1P13674 534 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 LCP1P13796 627 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 ACP1P24666 158 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 MZF1P28698 734 aaPredicted RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 ARRB1P49407 418 aaPredicted RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 HARS2P49590 506 aaKnown RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 CLDN2P57739 230 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 RHDQ02161 417 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 STK4Q13043 487 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 CLN3Q13286 438 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 STK38Q15208 465 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 HNRNPA1L2Q32P51 320 aaKnown RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 ZSCAN23Q3MJ62 389 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 PITRM1Q5JRX3 1037 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBCELQ5QJ74 424 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 PIK3R6Q5UE93 754 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 BROXQ5VW32 411 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3GQ6DHY5 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3CQ6IPX1 549 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 C12orf56Q8IXR9 622 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TBC1D3Q8IZP1 549 aaPredicted RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 MEIOBQ8N635 442 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 EXD3Q8N9H8 876 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 ARRDC3Q96B67 414 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 FAM129BQ96TA1 746 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 SLC2A11Q9BYW1 496 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 NIF3L1Q9GZT8 377 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 TSPAN10Q9H1Z9 355 aaPredicted RBP10.27□□□□□ -0.77
LINC02561-201ENST00000449457 PNPLA8Q9NP80 782 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 PPP4R2Q9NY27 417 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 ARHGAP20Q9P2F6 1191 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 ERVW-1Q9UQF0 538 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 U3KQA8 63 aa10.27□□□□□ -0.77
LINC02561-201ENST00000449457 A6NJY4 79 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 C10orf142B7Z368 130 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 CAPN5O15484 640 aaPredicted RBP10.26□□□□□ -0.77
LINC02561-201ENST00000449457 KLRC4O43908 158 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 BNIP3LO60238 219 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 OPA1O60313 960 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 ZBED1O96006 694 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 C1SP09871 688 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 GIMD1P0DJR0 217 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 SYT1P21579 422 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 RAD23BP54727 409 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 SLC39A14Q15043 492 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 TCEA2Q15560 299 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 RAB41Q5JT25 222 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 COLEC12Q5KU26 742 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 BSPRYQ5W0U4 402 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 HIST2H2BCQ6DN03 193 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 OR6B2Q6IFH4 312 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 NAPEPLDQ6IQ20 393 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 USP30Q70CQ3 517 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 SCG3Q8WXD2 468 aaKnown RBP10.26□□□□□ -0.77
LINC02561-201ENST00000449457 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 ATXN7L3BQ96GX2 97 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 C7orf25Q9BPX7 421 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 CALN1Q9BXU9 219 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 KCTD10Q9H3F6 313 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 SYNDIG1Q9H7V2 258 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 DMAC2Q9NW81 257 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 TSPAN16Q9UKR8 245 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 CEP83Q9Y592 693 aa10.26□□□□□ -0.77
LINC02561-201ENST00000449457 UBR5O95071 2799 aaPredicted RBP10.25□□□□□ -0.77
LINC02561-201ENST00000449457 FAM187AA6NFU0 413 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 SLC31A1O15431 190 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 TIMM44O43615 452 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 DFNA5O60443 496 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 ATP5BP06576 529 aaKnown RBP10.25□□□□□ -0.77
LINC02561-201ENST00000449457 TGM2P21980 687 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 DGKAP23743 735 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 RXRGP48443 463 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 VAMP7P51809 220 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 ST8SIA6P61647 398 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 ZBTB16Q05516 673 aa10.25□□□□□ -0.77
LINC02561-201ENST00000449457 TLR1Q15399 786 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms