RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 SMYD5Q6GMV2 418 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 MSANTD2Q6P1R3 559 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 DENND1BQ6P3S1 775 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 KANSL1Q7Z3B3 1105 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 CARNMT1Q8N4J0 409 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 HJURPQ8NCD3 748 aaPredicted RBP13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 OR14C36Q8NHC7 312 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 STK32AQ8WU08 396 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 FGF11Q92914 225 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 ERVW-1Q9UQF0 538 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 CEP83Q9Y592 693 aa13.66□□□□□ -0.22
CTHRC1-202ENST00000415886 TLR4O00206 839 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 IRAK2O43187 625 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 SDC3O75056 442 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 GABBR2O75899 941 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 CKMT2P17540 419 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 GLDCP23378 1020 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 TBX4P57082 545 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 CXADRP78310 365 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 INSM1Q01101 510 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 APBA1Q02410 837 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 TLE3Q04726 772 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 RAPGEF1Q13905 1077 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 ARID5BQ14865 1188 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 MEA1Q16626 185 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 SLC45A4Q5BKX6 768 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 PITRM1Q5JRX3 1037 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 NUGGCQ68CJ6 796 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 SND1Q7KZF4 910 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 ERICH1Q86X53 443 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 SPATS2Q86XZ4 545 aaKnown RBP13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 SPACA3Q8IXA5 215 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 STK40Q8N2I9 435 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 ZNF557Q8N988 423 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 CLEC4CQ8WTT0 213 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 FAM129BQ96TA1 746 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 DDX50Q9BQ39 737 aaKnown RBP13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 SYNCQ9H7C4 482 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 CLCA2Q9UQC9 943 aa13.65□□□□□ -0.22
CTHRC1-202ENST00000415886 EDDM13A0A1B0GTR0 161 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 TARSL2A2RTX5 802 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 TYW5A2RUC4 315 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 FOXN3O00409 490 aaPredicted RBP13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 GOT1P17174 413 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 ACTN2P35609 894 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 RXRGP48443 463 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 NUMBP49757 651 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 METAP1P53582 386 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 CFHR1Q03591 330 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 ILKQ13418 452 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 CDH18Q13634 790 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 STX1AQ16623 288 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D25Q3MII6 688 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 NAPEPLDQ6IQ20 393 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 KDM7AQ6ZMT4 941 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 CCDC117Q8IWD4 279 aaPredicted RBP13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 CFAP52Q8N1V2 620 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 OXR1Q8N573 874 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 KDM1BQ8NB78 822 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 RFFLQ8WZ73 363 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 SHC3Q92529 594 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 PPP1R13BQ96KQ4 1090 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 RPL10LQ96L21 214 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 SERPINB11Q96P15 392 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 SLC4A5Q9BY07 1137 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 NUCKS1Q9H1E3 243 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 VPS16Q9H269 839 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 ERVMER34-1Q9H9K5 563 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 ACP6Q9NPH0 428 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 SLC12A6Q9UHW9 1150 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 SLCO3A1Q9UIG8 710 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 ITIH6Q6UXX5 1313 aa13.64□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3DA0A087WVF3 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3IA0A087WXS9 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3EA0A087X179 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3KA0A087X1G2 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3FA6NER0 549 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 BECN2A8MW95 431 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3LB9A6J9 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 LATO43561 262 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 LUC7L3O95232 432 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 ADH1BP00325 375 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 IL1BP01584 269 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 SRPRAP08240 638 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 TBC1D3HP0C7X1 549 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 C5AR1P21730 350 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 ACP1P24666 158 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 MZF1P28698 734 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 MAT2AP31153 395 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 DRD3P35462 400 aa13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 STK19P49842 368 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 DRAP1Q14919 205 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-202ENST00000415886 PROX2Q3B8N5 592 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms