RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 BARX1Q9HBU1 254 aaPredicted RBP7.09□□□□□ -1.27
CSNK2A1-204ENST00000400227 CYP39A1Q9NYL5 469 aa7.09□□□□□ -1.27
CSNK2A1-204ENST00000400227 FBXO10Q9UK96 956 aa7.09□□□□□ -1.27
CSNK2A1-204ENST00000400227 R3HDM2Q9Y2K5 976 aaKnown RBP7.09□□□□□ -1.27
CSNK2A1-204ENST00000400227 PTPN22Q9Y2R2 807 aa7.09□□□□□ -1.27
CSNK2A1-204ENST00000400227 PTPRJQ12913 1337 aa7.09□□□□□ -1.27
CSNK2A1-204ENST00000400227 ZNF541Q9H0D2 1346 aa7.09□□□□□ -1.27
CSNK2A1-204ENST00000400227 POLR2AP24928 1970 aaKnown RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 UBA6A0AVT1 1052 aaPredicted RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 RASGRF2O14827 1237 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ASAP2O43150 1006 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 PSTPIP1O43586 416 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 GHRP10912 638 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 HOXA5P20719 270 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 GLRA2P23416 452 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ICAM3P32942 547 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 MAN1A1P33908 653 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CHKAP35790 457 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 PIK3CAP42336 1068 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 LIG4P49917 911 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 TAS2R40P59535 323 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 NOMO3P69849 1222 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 SMAD3P84022 425 aaKnown RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 SP2Q02086 613 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CAV1Q03135 178 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ADCY1Q08828 1119 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 KLF1Q13351 362 aaPredicted RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 SNX1Q13596 522 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CUL2Q13617 745 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CNGA2Q16280 664 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ANKRD20A8PQ5CZ79 823 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 LIN9Q5TKA1 542 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 LMBRD2Q68DH5 695 aaPredicted RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 SPOPLQ6IQ16 392 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 MIS18BP1Q6P0N0 1132 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CCDC121Q6ZUS5 278 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 PIGWQ7Z7B1 504 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 PHLDB2Q86SQ0 1253 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 EXOC3L1Q86VI1 746 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 PHF13Q86YI8 300 aaPredicted RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ABRAQ8N0Z2 381 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 GRK7Q8WTQ7 553 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ATG4AQ8WYN0 398 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 P3H4Q92791 437 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 USP7Q93009 1102 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 SNF8Q96H20 258 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 AJUBAQ96IF1 538 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 VCPIP1Q96JH7 1222 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 MAML3Q96JK9 1138 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZBTB45Q96K62 511 aaPredicted RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 SERPINB12Q96P63 405 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CGRRF1Q99675 332 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 SELENOSQ9BQE4 189 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 JPH2Q9BR39 696 aaPredicted RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 DDX23Q9BUQ8 820 aaKnown RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 KATNBL1Q9H079 304 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 STMN4Q9H169 189 aaPredicted RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 PORCNQ9H237 461 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CDC42EP4Q9H3Q1 356 aaKnown RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 DHX33Q9H6R0 707 aaKnown RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZMAT4Q9H898 229 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 AS3MTQ9HBK9 375 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 A1CFQ9NQ94 594 aaKnown RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 RAPGEFL1Q9UHV5 662 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 KCNG1Q9UIX4 513 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 HACL1Q9UJ83 578 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 ADAM29Q9UKF5 820 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 AGO2Q9UKV8 859 aaKnown RBP7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 CNTNAP2Q9UHC6 1331 aa7.08□□□□□ -1.28
CSNK2A1-204ENST00000400227 IGKV6D-21A0A0A0MT36 114 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 A0A0B4J269 797 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 SMIM23A6NLE4 172 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 CCT8L1PA6NM43 557 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 C19orf81C9J6K1 198 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 DNM1LO00429 736 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 MAFO75444 373 aaPredicted RBP7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 TCEA3O75764 348 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 RASSF9O75901 435 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 EDN1P05305 212 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 CLTAP09496 248 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 APEX1P27695 318 aaKnown RBP7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 NAMPTP43490 491 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 NSFP46459 744 aaKnown RBP7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 ACOT2P49753 483 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 GMPSP49915 693 aaPredicted RBP7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZNF132P52740 706 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 ITGA8P53708 1063 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 HMGCS2P54868 508 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 CD83Q01151 205 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 SLC6A3Q01959 620 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 ROM1Q03395 351 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 CALCOCO2Q13137 446 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 TOP3AQ13472 1001 aaPredicted RBP7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 MAMLD1Q13495 774 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 LRRC32Q14392 662 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 LLGL1Q15334 1064 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 CCNG2Q16589 344 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 ZBTB41Q5SVQ8 909 aa7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 GKAP1Q5VSY0 366 aaPredicted RBP7.07□□□□□ -1.28
CSNK2A1-204ENST00000400227 ICE2Q659A1 982 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms