RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 GORASP1Q9BQQ3 440 aa16.67■□□□□ 0.26
VPS16-203ENST00000380469 NMRAL1Q9HBL8 299 aa16.67■□□□□ 0.26
VPS16-203ENST00000380469 C20orf96Q9NUD7 363 aaPredicted RBP16.67■□□□□ 0.26
VPS16-203ENST00000380469 MID2Q9UJV3 735 aa16.67■□□□□ 0.26
VPS16-203ENST00000380469 ZNF638Q14966 1978 aaKnown RBP16.66■□□□□ 0.26
VPS16-203ENST00000380469 BUD23O43709 281 aaKnown RBP16.66■□□□□ 0.26
VPS16-203ENST00000380469 ATP9BO43861 1147 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 LYNP07948 512 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 FAM200BP0CF97 657 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 CYP2B6P20813 491 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 GJA5P36382 358 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 CSE1LP55060 971 aaKnown RBP16.66■□□□□ 0.26
VPS16-203ENST00000380469 MPP3Q13368 585 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 CCNIQ14094 377 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 ARL13BQ3SXY8 428 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 PAQR9Q6ZVX9 377 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 RAPH1Q70E73 1250 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 KCNMB4Q86W47 210 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 PHTF2Q8N3S3 785 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 FBXW8Q8N3Y1 598 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
VPS16-203ENST00000380469 SHKBP1Q8TBC3 707 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 ADAM32Q8TC27 787 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 CCDC124Q96CT7 223 aaKnown RBP16.66■□□□□ 0.26
VPS16-203ENST00000380469 GBP5Q96PP8 586 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 GBA3Q9H227 469 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 ABHD16BQ9H3Z7 469 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 CAB39LQ9H9S4 337 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
VPS16-203ENST00000380469 PDCD11Q14690 1871 aaKnown RBP16.66■□□□□ 0.26
VPS16-203ENST00000380469 E9PBE3 544 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 KLHL41O60662 606 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 C2P06681 752 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 APOA4P06727 396 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 CALRP27797 417 aaKnown RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 HADHAP40939 763 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 IRF9Q00978 393 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 SCAPQ12770 1279 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 TBL3Q12788 808 aaKnown RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 CERCAMQ5T4B2 595 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 NAPRTQ6XQN6 538 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 FRMD7Q6ZUT3 714 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 CLEC14AQ86T13 490 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 PPP1R13LQ8WUF5 828 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 DNAJB3Q8WWF6 145 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 SLC10A4Q96EP9 437 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 MFSD3Q96ES6 412 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 TSNARE1Q96NA8 513 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 RTKNQ9BST9 563 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 ULBP1Q9BZM6 244 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 ILKAPQ9H0C8 392 aaPredicted RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 MAN1C1Q9NR34 630 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 FBXW11Q9UKB1 542 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 MAGED2Q9UNF1 606 aaPredicted RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 SERPINB6P35237 376 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 KLF10Q13118 480 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 SNX17Q15036 470 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 SLC9B1Q4ZJI4 515 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 INTS6LQ5JSJ4 861 aaKnown RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 WSCD1Q658N2 575 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 KCTD11Q693B1 232 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 SLC30A9Q6PML9 568 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 RNF169Q8NCN4 708 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 IFT43Q96FT9 208 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 KCNK16Q96T55 309 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 OXCT2Q9BYC2 517 aaPredicted RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 KLHL4Q9C0H6 718 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 IL22Q9GZX6 179 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 IARS2Q9NSE4 1012 aaKnown RBP16.65■□□□□ 0.26
VPS16-203ENST00000380469 TLK1Q9UKI8 766 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 POMPQ9Y244 141 aa16.65■□□□□ 0.26
VPS16-203ENST00000380469 PDHXO00330 501 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 NRP1O14786 923 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 FAM163BP0C2L3 166 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 SEMA3BQ13214 749 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 HNRNPDQ14103 355 aaKnown RBP16.64■□□□□ 0.25
VPS16-203ENST00000380469 PRPSAP1Q14558 356 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 DLG2Q15700 870 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 PDSS2Q86YH6 399 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 VAT1Q99536 393 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 TINF2Q9BSI4 451 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 FAM192AQ9GZU8 254 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 WDR6Q9NNW5 1121 aaKnown RBP16.64■□□□□ 0.25
VPS16-203ENST00000380469 TCF7L2Q9NQB0 619 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 PAPOLBQ9NRJ5 636 aaKnown RBP16.64■□□□□ 0.25
VPS16-203ENST00000380469 IPPQ9Y573 584 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 AP3B1O00203 1094 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
VPS16-203ENST00000380469 ZBTB14O43829 449 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 FYNP06241 537 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 ZCCHC18P0CG32 403 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 GNAT1P11488 350 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 NCAM1P13591 858 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 CD68P34810 354 aaPredicted RBP16.64■□□□□ 0.25
VPS16-203ENST00000380469 ABCG1P45844 678 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 XIAPP98170 497 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 UBXN11Q5T124 520 aa16.64■□□□□ 0.25
VPS16-203ENST00000380469 HPS6Q86YV9 775 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms