RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 RBM22Q9NW64 420 aaKnown RBP eCLIP13.55□□□□□ -0.249e-6■□□□□ 9.6
RAPGEF1-201ENST00000372189 NAALADL1Q9UQQ1 740 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 TISP43B9A030 160 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 FCGR1AP12314 374 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ATP5C1P36542 298 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 GRIK3Q13003 919 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 NFIL3Q16649 462 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 DCLRE1AQ6PJP8 1040 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 SLC35C1Q96A29 364 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 RHOBTB2Q9BYZ6 727 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 MAF1Q9H063 256 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 CDT1Q9H211 546 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 IGSF6O95976 241 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 LTFP02788 710 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 TMEM161BQ8NDZ6 487 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 GLMNQ92990 594 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ZFRQ96KR1 1074 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 EHD1Q9H4M9 534 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 CCDC59Q9P031 241 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 RNF112Q9ULX5 631 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 SELPP16109 830 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 KCNA10Q16322 511 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 C11orf96Q7Z7L8 435 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 PHACTR4Q8IZ21 702 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 MYO1HQ8N1T3 1032 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 MTERF3Q96E29 417 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 CORO1BQ9BR76 489 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 CYTH4Q9UIA0 394 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 A0A0G2JLL6 359 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 RBAK-RBAKDNI3L0D1 243 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 RNF103O00237 685 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 PTPN7P35236 360 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 PRMT2P55345 433 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ST3GAL1Q11201 340 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 CCDC153Q494R4 210 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 NT5DC1Q5TFE4 455 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 PRRT2Q7Z6L0 340 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 LZTR1Q8N653 840 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 GPR20Q99678 358 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ULBP1Q9BZM6 244 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 OSGEPQ9NPF4 335 aa13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 RUVBL2Q9Y230 463 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-201ENST00000372189 ABCC6O95255 1503 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 SERPINF2P08697 491 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 CHRNB3Q05901 458 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 TRAP1Q12931 704 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 CAMK2GQ13555 558 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 SNX30Q5VWJ9 437 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 RIN3Q8TB24 985 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 NAT9Q9BTE0 207 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 KCTD10Q9H3F6 313 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 METTL8Q9H825 291 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 EIF3LQ9Y262 564 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 SCAMP1O15126 338 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 SARSP49591 514 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 IRGCQ6NXR0 463 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 COLGALT2Q8IYK4 626 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 TEX19Q8NA77 164 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 IARS2Q9NSE4 1012 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 MARCH2Q9P0N8 246 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 SKAP2O75563 359 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 MAGEA2P43356 314 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 TP53BP2Q13625 1128 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 AKIRIN2Q53H80 203 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 PLEKHA7Q6IQ23 1121 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 COLGALT1Q8NBJ5 622 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 FAM192AQ9GZU8 254 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 SEMA4AQ9H3S1 761 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 GLP2RO95838 553 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 FUT11Q495W5 492 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 ERICH5Q6P6B1 374 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 ETNPPLQ8TBG4 499 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 DNMT3LQ9UJW3 386 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 STOML2Q9UJZ1 356 aa13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-201ENST00000372189 MAP2K7O14733 419 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 HSMCR30P0CW71 290 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 PLCL1Q15111 1095 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 UGCGQ16739 394 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 HECTD3Q5T447 861 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TPGS1Q6ZTW0 290 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TTC29Q8NA56 475 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 FAM129BQ96TA1 746 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 IMPAD1Q9NX62 359 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TMCC3Q9ULS5 477 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 DUSP11O75319 330 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 ARF4P18085 180 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 MPP2Q14168 576 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms