RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 FANCEQ9HB96 536 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 ZFYVE1Q9HBF4 777 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 LIMD1Q9UGP4 676 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 CPS1P31327 1500 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 DDNO94850 711 aaPredicted RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 BDNFP23560 247 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 FHDC1Q9C0D6 1143 aaPredicted RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 SLC39A8Q9C0K1 460 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 MRPL39Q9NYK5 338 aaKnown RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 PARNO95453 639 aaKnown RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 ETS1P14921 441 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 SNRPD1P62314 119 aaKnown RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 TPGS1Q6ZTW0 290 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 C1QTNF3-AMACRE9PGA6 284 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 APBA2Q99767 749 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 C2orf49Q9BVC5 232 aaPredicted RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 RNF208Q9H0X6 261 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 TPRKBQ9Y3C4 175 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 RIPK2O43353 540 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 PDE5AO76074 875 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 CATP04040 527 aaKnown RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 RARRES1P49788 294 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 MAP1SQ66K74 1059 aaPredicted RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 SCUBE3Q8IX30 993 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 EPB41L4BQ9H329 900 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 EXO5Q9H790 373 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 RXFP1Q9HBX9 757 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 ATAD3AQ9NVI7 634 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 RAB23Q9ULC3 237 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 BCLAF3A2AJT9 711 aaKnown RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 SGTAO43765 313 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 MT-CO1P00395 513 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 TSPAN19P0C672 248 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 FAM58BPP0C7Q3 252 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 LBPP18428 481 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 MAPK8P45983 427 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 SCTRP47872 440 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 FBXO25Q8TCJ0 367 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 P2RX7Q99572 595 aaKnown RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 NAALADL1Q9UQQ1 740 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 MRASO14807 208 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 LDLRP01130 860 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 CYP2C18P33260 490 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 ACSM2AQ08AH3 577 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 NOL9Q5SY16 702 aaKnown RBP23.48■■□□□ 1.35
NPAS3-201ENST00000346562 ACSM2BQ68CK6 577 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 NYAP1Q6ZVC0 841 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 ZNF605Q86T29 641 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 CACUL1Q86Y37 369 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 ADAM32Q8TC27 787 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 COQ6Q9Y2Z9 468 aa23.48■■□□□ 1.35
NPAS3-201ENST00000346562 KPNA5O15131 536 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 ARMC4Q5T2S8 1044 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 IL27RAQ6UWB1 636 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 ADAM2Q99965 735 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 CLEC4MQ9H2X3 399 aaPredicted RBP23.47■■□□□ 1.35
NPAS3-201ENST00000346562 TMEM216Q9P0N5 145 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 DNPEPQ9ULA0 475 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 MYPNQ86TC9 1320 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 HMGCRP04035 888 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 RHBGQ9H310 441 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 MARCH2Q9P0N8 246 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 DNMT3LQ9UJW3 386 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 FRMPD4Q14CM0 1322 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 HLA-DQA2P01906 255 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 SHMT1P34896 483 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 ZFP28Q8NHY6 868 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 KCNH1O95259 989 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 EIF4BP23588 611 aaKnown RBP23.47■■□□□ 1.35
NPAS3-201ENST00000346562 TCEAL5Q5H9L2 206 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 IZUMO2Q6UXV1 221 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 DENND6AQ8IWF6 608 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 ATL1Q8WXF7 558 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 DUSP10Q9Y6W6 482 aa23.47■■□□□ 1.35
NPAS3-201ENST00000346562 TSC22D2O75157 780 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 CLPTM1O96005 669 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 TRIM32Q13049 653 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 CAVIN3Q969G5 261 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 RIBC2Q9H4K1 309 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 NRXN1Q9ULB1 1477 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 SEC23AQ15436 765 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 LYPLAL1Q5VWZ2 237 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 ZNF621Q6ZSS3 439 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 DSELQ8IZU8 1212 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 FAIM2Q9BWQ8 316 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 COPG2Q9UBF2 871 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 PSME2Q9UL46 239 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 IFNA16P05015 189 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 TOB1P50616 345 aaPredicted RBP23.46■■□□□ 1.35
NPAS3-201ENST00000346562 NEK3P51956 506 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 ASAH2Q9NR71 780 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 VAV3Q9UKW4 847 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 INPP4BO15327 924 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 LGALS2P05162 132 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 ITGAXP20702 1163 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 RALGDSQ12967 914 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 FAM187BQ17R55 369 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 PLEKHA7Q6IQ23 1121 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 ELMO1Q92556 727 aa23.46■■□□□ 1.35
NPAS3-201ENST00000346562 AKT1S1Q96B36 256 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms