RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 BCCIPQ9P287 314 aaKnown RBP eCLIP13.55□□□□□ -0.24
TUBD1-202ENST00000340993 PPARGC1AQ9UBK2 798 aaKnown RBP13.55□□□□□ -0.24
TUBD1-202ENST00000340993 ZNF212Q9UDV6 495 aa13.55□□□□□ -0.24
TUBD1-202ENST00000340993 STON1Q9Y6Q2 735 aa13.55□□□□□ -0.24
TUBD1-202ENST00000340993 EML5Q05BV3 1969 aa13.55□□□□□ -0.24
TUBD1-202ENST00000340993 CHD5Q8TDI0 1954 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 H3BRJ5 948 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 K7ERQ8 282 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 RAMP2O60895 175 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 PALMO75781 387 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 MTA2O94776 668 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 MT-CO1P00395 513 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
TUBD1-202ENST00000340993 NTSR1P30989 418 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 ARL4AP40617 200 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 AIF1P55008 147 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 DYNLT1P63172 113 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 ECT2LQ008S8 904 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 GNA12Q03113 381 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 PTPRNQ16849 979 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 C5orf22Q49AR2 442 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 BOLA3Q53S33 107 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 KAZNQ674X7 775 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 RNF43Q68DV7 783 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 POLNQ7Z5Q5 900 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 MAML2Q8IZL2 1156 aaPredicted RBP13.54□□□□□ -0.24
TUBD1-202ENST00000340993 NPWQ8N729 165 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 PRSS33Q8NF86 280 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 WFIKKN2Q8TEU8 576 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 KRT35Q92764 455 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 HMCESQ96FZ2 354 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 CSPG4P5Q96PW8 444 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 PSMB7Q99436 277 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 KLC2Q9H0B6 622 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 CATSPERBQ9H7T0 1116 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 ERVW-1Q9UQF0 538 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 CAPN6Q9Y6Q1 641 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 GON4LQ3T8J9 2241 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
TUBD1-202ENST00000340993 CHURC1-FNTBB4DL54 471 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 DLDP09622 509 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 MAN1A1P33908 653 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 FNTBP49356 437 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 CCR3P51677 355 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 MRPS21P82921 87 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 NRG1Q02297 640 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 SRSF5Q13243 272 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 DPYSL3Q14195 570 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 POLD3Q15054 466 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 DPYSL2Q16555 572 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 POM121L1PQ3SYA9 428 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 SDE2Q6IQ49 451 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 ARHGAP36Q6ZRI8 547 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 SYNPOQ8N3V7 929 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 RTL3Q8N8U3 475 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 TSTD1Q8NFU3 115 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 ACDQ96AP0 544 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 CD93Q9NPY3 652 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 TMEM248Q9NWD8 314 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 THAP10Q9P2Z0 257 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 MMP17Q9ULZ9 603 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 TBC1D30Q9Y2I9 924 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 A0A0A0MRY4 1105 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 A0A0A6YYK5 440 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 PJA2O43164 708 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 GALR2O43603 387 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 SYNCRIPO60506 623 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 CCDC175P0C221 793 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 DGKEP52429 567 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 DPYSQ14117 519 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 B4GALNT4Q76KP1 1039 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 SETD3Q86TU7 594 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 CCDC50Q8IVM0 306 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 ALG14Q96F25 216 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 NOL6Q9H6R4 1146 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 FCF1Q9Y324 198 aaKnown RBP13.53□□□□□ -0.24
TUBD1-202ENST00000340993 OR51B4Q9Y5P0 310 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 R4GN57 208 aa13.53□□□□□ -0.24
TUBD1-202ENST00000340993 ABCA7Q8IZY2 2146 aa13.52□□□□□ -0.24
TUBD1-202ENST00000340993 RASA4BC9J798 803 aa13.52□□□□□ -0.25
TUBD1-202ENST00000340993 FGF10O15520 208 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-202ENST00000340993 RASA4O43374 803 aa13.52□□□□□ -0.25
TUBD1-202ENST00000340993 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
TUBD1-202ENST00000340993 ATG13O75143 517 aa13.52□□□□□ -0.25
TUBD1-202ENST00000340993 KRT7P08729 469 aa13.52□□□□□ -0.25
TUBD1-202ENST00000340993 OXCT1P55809 520 aa13.52□□□□□ -0.25
TUBD1-202ENST00000340993 EIF4HQ15056 248 aaKnown RBP13.52□□□□□ -0.25
TUBD1-202ENST00000340993 CRY1Q16526 586 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms