RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 THSD7AQ9UPZ6 1657 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 VWA3AA6NCI4 1184 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 C1QTNF3-AMACRE9PGA6 284 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 RAD51BO15315 384 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 S100A6P06703 90 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CSH1P0DML2 217 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CSH2P0DML3 217 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CFL1P23528 166 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 DNAJB1P25685 340 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 VAMP7P51809 220 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 POLE2P56282 527 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 FOXO4P98177 505 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CXCL9Q07325 125 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 TCP11X2Q5H9J9 407 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ALKBH5Q6P6C2 394 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF589Q86UQ0 364 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 VSTM4Q8IW00 320 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 MICU2Q8IYU8 434 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF655Q8N720 491 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 BPIFB6Q8NFQ5 453 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 HCAR2Q8TDS4 363 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 TM9SF4Q92544 642 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ITPKCQ96DU7 683 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 RNF145Q96MT1 663 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ZSCAN10Q96SZ4 725 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 GORASP1Q9BQQ3 440 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 TMEM39BQ9GZU3 492 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SP110Q9HB58 689 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 MLXIPLQ9NP71 852 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SOHLH2Q9NX45 425 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 RAB19A4D1S5 217 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 C9J4A7 227 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 GNB5O14775 395 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SEPT4O43236 478 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 AHCYL1O43865 530 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 GMFGO60234 142 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SRPRAP08240 638 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 PDHBP11177 359 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SDC4P31431 198 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CDH8P55286 799 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 NCALDP61601 193 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ROR2Q01974 943 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CHRNB3Q05901 458 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ALX1Q15699 326 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 GPR142Q7Z601 462 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 KSR1Q8IVT5 923 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SYTL1Q8IYJ3 562 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 FAM13CQ8NE31 585 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 KLHL25Q9H0H3 589 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 PCDHGB2Q9Y5G2 931 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SYNJ2BP-COX16A0A087WUM0 186 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 A0A0A6YYK5 440 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 TSPAN4O14817 238 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ATP2C2O75185 946 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 PET100P0DJ07 73 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 WEE1P30291 646 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SOX5P35711 763 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CAPGP40121 348 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 KCNK10P57789 538 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 GUCY2DQ02846 1103 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 NFYCQ13952 458 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CRY1Q16526 586 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 IMPG1Q17R60 797 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 EFHC2Q5JST6 749 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 METTL21CQ5VZV1 264 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CCNI2Q6ZMN8 369 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 RTL10Q7L3V2 364 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ACOT1Q86TX2 421 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SIRT2Q8IXJ6 389 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CHTF18Q8WVB6 975 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ATL1Q8WXF7 558 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 PDLIM2Q96JY6 352 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CDCA3Q99618 268 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 TDRD1Q9BXT4 1180 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 LRRC2Q9BYS8 371 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SLC6A16Q9GZN6 736 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SMYD3Q9H7B4 428 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 SARS2Q9NP81 518 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 COX16Q9P0S2 106 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CACFD1Q9UGQ2 172 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 V9GY48 417 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CACNA1CQ13936 2221 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 FAM220BPB1ANY3 271 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 AP3D1O14617 1153 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CHST10O43529 356 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 ONECUT3O60422 494 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 KRT34O76011 436 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CD2BP2O95400 341 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 NTSR2O95665 410 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CLUP10909 449 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 AKR1B1P15121 316 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 NFKB1P19838 968 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CDC25CP30307 473 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 CACNB3P54284 484 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 AIF1P55008 147 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 DRG2P55039 364 aaKnown RBP3.34□□□□□ -1.87
CSMD3-202ENST00000339701 FOXK2Q01167 660 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 DSG1Q02413 1049 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 BNIP1Q12981 228 aa3.34□□□□□ -1.87
CSMD3-202ENST00000339701 PDK2Q15119 407 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms