RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 NID2Q14112 1375 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 PTPRUQ92729 1446 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 LOC100506127A0A0U1RQW1 187 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 SDR42E2A6NKP2 422 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 CLIC3O95833 236 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 TBXAS1P24557 533 aaPredicted RBP12.55□□□□□ -0.4
EBF1-201ENST00000313708 KRT20P35900 424 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 TCF7P36402 384 aaPredicted RBP12.55□□□□□ -0.4
EBF1-201ENST00000313708 GNL1P36915 607 aaPredicted RBP12.55□□□□□ -0.4
EBF1-201ENST00000313708 PPP3CAQ08209 521 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 TCP10Q12799 353 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 MERTKQ12866 999 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 RHBDF2Q6PJF5 856 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 ZNF720Q7Z2F6 126 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 ZNF669Q96BR6 464 aaPredicted RBP12.55□□□□□ -0.4
EBF1-201ENST00000313708 FAR2Q96K12 515 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 ZNF512Q96ME7 567 aaPredicted RBP12.55□□□□□ -0.4
EBF1-201ENST00000313708 ZNF347Q96SE7 839 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 TMEM246Q9BRR3 403 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 ZSCAN5AQ9BUG6 496 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 HPS4Q9NQG7 708 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 XPNPEP3Q9NQH7 507 aa12.55□□□□□ -0.4
EBF1-201ENST00000313708 CCDC177Q9NQR7 707 aaPredicted RBP12.55□□□□□ -0.4
EBF1-201ENST00000313708 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.55□□□□□ -0.4
EBF1-201ENST00000313708 F8VP50 259 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 TRDMT1O14717 391 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 CPNE3O75131 537 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 HSMCR30P0CW71 290 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 PRDX6P30041 224 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 CRHR1P34998 444 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 IKBKEQ14164 716 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 DLGAP5Q15398 846 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 PHKG1Q16816 387 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 PTPN20Q4JDL3 420 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 CLEC10AQ8IUN9 316 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 P3H2Q8IVL5 708 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 CHPT1Q8WUD6 406 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.4
EBF1-201ENST00000313708 RUVBL2Q9Y230 463 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 SPATA31D1Q6ZQQ2 1576 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 FAM20BO75063 409 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 RGS20O76081 388 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 ATE1O95260 518 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 HADHBP55084 474 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 GPX6P59796 221 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 RPS8P62241 208 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 CHRNB3Q05901 458 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 ARHGEF6Q15052 776 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 KLHL17Q6TDP4 642 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 THNSL1Q8IYQ7 743 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 GPD1LQ8N335 351 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 COQ3Q9NZJ6 369 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 WDR27A2RRH5 827 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 PRKD3O94806 890 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 CCNYL2Q5T2Q4 361 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 CPT1BQ92523 772 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 MAELQ96JY0 434 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 UCKL1Q9NWZ5 548 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 ATPIF1Q9UII2 106 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 CNOT6Q9ULM6 557 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 VPS4AQ9UN37 437 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 C12orf71A8MTZ7 269 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 HS6ST1O60243 411 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 NFYCQ13952 458 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 NSUN6Q8TEA1 469 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 MKL1Q969V6 931 aa12.54□□□□□ -0.4
EBF1-201ENST00000313708 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 CCDC59Q9P031 241 aaKnown RBP12.54□□□□□ -0.4
EBF1-201ENST00000313708 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
EBF1-201ENST00000313708 ICMTO60725 284 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 PMS2P3Q13401 168 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 STRA8Q7Z7C7 330 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 RDM1Q8NG50 284 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 KCTD4Q8WVF5 259 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SETDB2Q96T68 719 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 EMILIN2Q9BXX0 1053 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 RPF2Q9H7B2 306 aaKnown RBP12.53□□□□□ -0.4
EBF1-201ENST00000313708 CYP4F12Q9HCS2 524 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 C8orf4Q9NR00 106 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 NSMCE4AQ9NXX6 385 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 VTI1BQ9UEU0 232 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 MYH7P12883 1935 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 ARPC4-TTLL3A0A0A6YYG9 625 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 TSHRP16473 764 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 NSUN2Q08J23 767 aaKnown RBP eCLIP12.53□□□□□ -0.4
EBF1-201ENST00000313708 NFATC3Q12968 1075 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 VASH1Q7L8A9 365 aaPredicted RBP12.53□□□□□ -0.4
EBF1-201ENST00000313708 FAM71AQ8IYT1 594 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 GLIS1Q8NBF1 620 aa12.53□□□□□ -0.4
EBF1-201ENST00000313708 SHCBP1Q8NEM2 672 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms