RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CCDC142Q17RM4 750 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
SGCA-201ENST00000262018 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 EGFLAMQ63HQ2 1017 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 LCLAT1Q6UWP7 414 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 NUDT18Q6ZVK8 323 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 SPATA2LQ8IUW3 424 aaPredicted RBP13.78□□□□□ -0.2
SGCA-201ENST00000262018 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 RASGEF1CQ8N431 466 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 KIAA1958Q8N8K9 716 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 HEXIM2Q96MH2 286 aaKnown RBP13.78□□□□□ -0.2
SGCA-201ENST00000262018 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 SELENOOQ9BVL4 669 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 RNF38Q9H0F5 515 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 NME7Q9Y5B8 376 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 RAD54BQ9Y620 910 aa13.78□□□□□ -0.2
SGCA-201ENST00000262018 A0A1B0GVT2 93 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 ERVH48-1M5A8F1 160 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 ATP8B1O43520 1251 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 TULP3O75386 442 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 WISP1O95388 367 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 PDGFRBP09619 1106 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 COMTP21964 271 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 MCM3P25205 808 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 CTNNA2P26232 953 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 DNA2P51530 1060 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 CLDN6P56747 220 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 GSCP56915 257 aaPredicted RBP13.77□□□□□ -0.21
SGCA-201ENST00000262018 MAMLD1Q13495 774 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 PREPLQ4J6C6 727 aaPredicted RBP13.77□□□□□ -0.21
SGCA-201ENST00000262018 C2CD6Q53TS8 623 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 ERICH1Q86X53 443 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 ETFBKMTQ8IXQ9 262 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 TERB1Q8NA31 727 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
SGCA-201ENST00000262018 MSANTD4Q8NCY6 345 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 SPATA4Q8NEY3 305 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 TOE1Q96GM8 510 aaKnown RBP13.77□□□□□ -0.21
SGCA-201ENST00000262018 MS4A14Q96JA4 679 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 BTBD6Q96KE9 485 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 PKMYT1Q99640 499 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 GPR174Q9BXC1 333 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 CD248Q9HCU0 757 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 PARVAQ9NVD7 372 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 EHD2Q9NZN4 543 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 ANAPC7Q9UJX3 599 aa13.77□□□□□ -0.21
SGCA-201ENST00000262018 TTC7AQ9ULT0 858 aaPredicted RBP13.77□□□□□ -0.21
SGCA-201ENST00000262018 TMEM110-MUSTN1A8MSY1 372 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 TRIM24O15164 1050 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 HCRTO43612 131 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 SLC1A1P43005 524 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 GPD2P43304 727 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 PSMC1P62191 440 aaKnown RBP13.76□□□□□ -0.21
SGCA-201ENST00000262018 SRSF1Q07955 248 aaKnown RBP eCLIP13.76□□□□□ -0.21
SGCA-201ENST00000262018 DCAF12L1Q5VU92 463 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 ARHGAP17Q68EM7 881 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 FAM171BQ6P995 826 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 CRYBG2Q8N1P7 616 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 UBL4BQ8N7F7 174 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 B3GALNT2Q8NCR0 500 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 MYCBPAPQ8TBZ2 947 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 CARD9Q9H257 536 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 SMARCAL1Q9NZC9 954 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 GMIPQ9P107 970 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 TBC1D14Q9P2M4 693 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 CYTH4Q9UIA0 394 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 LCMT1Q9UIC8 334 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 STRIP2Q9ULQ0 834 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 KNL1Q8NG31 2342 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 CABIN1Q9Y6J0 2220 aa13.76□□□□□ -0.21
SGCA-201ENST00000262018 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 B8ZZF3 427 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 M0QYV0 167 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 MYO1FO00160 1098 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 CEP104O60308 925 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 ATP2C2O75185 946 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PROSCO94903 275 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 H2AFXP16104 143 aaPredicted RBP13.75□□□□□ -0.21
SGCA-201ENST00000262018 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
SGCA-201ENST00000262018 CTNNA1P35221 906 aaKnown RBP13.75□□□□□ -0.21
SGCA-201ENST00000262018 HNF1BP35680 557 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 GRK6P43250 576 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 GABRB2P47870 512 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PEX5P50542 639 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 USP46P62068 366 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 C2orf54Q08AI8 447 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 ANO4Q32M45 955 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PTPN20Q4JDL3 420 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PKDCCQ504Y2 493 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 C4orf50Q6ZRC1 276 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 PHLDB2Q86SQ0 1253 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 C3orf20Q8ND61 904 aa13.75□□□□□ -0.21
SGCA-201ENST00000262018 SNIP1Q8TAD8 396 aaKnown RBP13.75□□□□□ -0.21
SGCA-201ENST00000262018 FUBP3Q96I24 572 aaKnown RBP eCLIP13.75□□□□□ -0.21
SGCA-201ENST00000262018 SEMA4CQ9C0C4 833 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms