RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 CLEC4AQ9UMR7 237 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ABHD14A-ACY1A0A1B0GW23 586 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SPAG6O75602 509 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TSPAN19P0C672 248 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CCNE1P24864 410 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 STARP49675 285 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FXR2P51116 673 aaKnown RBP eCLIP3.5□□□□□ -1.85
NEB-201ENST00000172853 SLC9B1Q4ZJI4 515 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 EPC2Q52LR7 807 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ADNP2Q6IQ32 1131 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SYDE1Q6ZW31 735 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 CXXC5Q7LFL8 322 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 HPS6Q86YV9 775 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SNX33Q8WV41 574 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NUSAP1Q9BXS6 441 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 ZNF518BQ9C0D4 1074 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 USP29Q9HBJ7 922 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SLC9A8Q9Y2E8 581 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 KDM5DQ9BY66 1539 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NR2C1P13056 603 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GPD1P21695 349 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CDH3P22223 829 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 EPHB2P29323 1055 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SCNN1AP37088 669 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 RRP1BQ14684 758 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 TXNRD1Q16881 649 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 LONRF1Q17RB8 773 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 JAZF1Q86VZ6 243 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 IFNEQ86WN2 208 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ELOA2Q8IYF1 753 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 OVCA2Q8WZ82 227 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NARS2Q96I59 477 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 IRF6O14896 467 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SLC26A4O43511 780 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TCEA3O75764 348 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 OGNP20774 298 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 CRISP1P54107 249 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TGFB2P61812 414 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GRAMD1AQ96CP6 724 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ECHDC3Q96DC8 303 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TIMMDC1Q9NPL8 285 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GMIPQ9P107 970 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 C19orf25Q9UFG5 118 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 TRPV2Q9Y5S1 764 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CATP04040 527 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 ENO1P06733 434 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 CCKBRP32239 447 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GSTM5P46439 218 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 AP5B1Q2VPB7 878 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SBK1Q52WX2 424 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM124AQ86V42 546 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 C3orf20Q8ND61 904 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CPT1CQ8TCG5 803 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SPPL2AQ8TCT8 520 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ATXN7L3BQ96GX2 97 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 HHATLQ9HCP6 504 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TBC1D23Q9NUY8 699 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TMEM260Q9NX78 707 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 MAT2BQ9NZL9 334 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM92AA1XBS5 289 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 RASA4BC9J798 803 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 UBE2Q2LH0YL09 131 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 RASA4O43374 803 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SYPP08247 313 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 AFF1P51825 1210 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 PNOCQ13519 176 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 MAPK11Q15759 364 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.5□□□□□ -1.85
NEB-201ENST00000172853 TMEM35AQ53FP2 167 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 AKIRIN2Q53H80 203 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 STYK1Q6J9G0 422 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SDR16C5Q8N3Y7 309 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CLIC6Q96NY7 704 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PPP1R10Q96QC0 940 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 A0A1B0GTH6 734 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ZNF879B4DU55 563 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 F5H6K3 240 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CBX4O00257 560 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 XKRYO14609 159 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 IFNGP01579 166 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 IL12BP29460 328 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAUP35544 74 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 KLRC3Q07444 240 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GXYLT1Q4G148 440 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 RBM43Q6ZSC3 357 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 TMEM26Q6ZUK4 368 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NT5DC3Q86UY8 548 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CCDC103Q8IW40 242 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TRPC4APQ8TEL6 797 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ORAI2Q96SN7 254 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ATP13A1Q9HD20 1204 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ARAP1Q96P48 1450 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 EFCAB10A6NFE3 127 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ENTPD3O75355 529 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SLC35G4P0C7Q5 338 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 JUNDP17535 347 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GCLMP48507 274 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NCOA4Q13772 614 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PTGISQ16647 500 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms