RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 AP4B1Q9Y6B7 739 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 MRPL42Q9Y6G3 142 aaKnown RBP14.33□□□□□ -0.12
USH1C-201ENST00000005226 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
USH1C-201ENST00000005226 TRIM13O60858 407 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 CLPTM1O96005 669 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 MYL4P12829 197 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 NAGLUP54802 743 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 MYBPC1Q00872 1141 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 DBN1Q16643 649 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 ARL13AQ5H913 290 aaPredicted RBP14.32□□□□□ -0.12
USH1C-201ENST00000005226 GRTP1Q5TC63 336 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 URGCPQ8TCY9 931 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 SLC2A14Q8TDB8 520 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 RNF139Q8WU17 664 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 PRICKLE1Q96MT3 831 aaPredicted RBP14.32□□□□□ -0.12
USH1C-201ENST00000005226 PHF12Q96QT6 1004 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 PRPF18Q99633 342 aaKnown RBP14.32□□□□□ -0.12
USH1C-201ENST00000005226 NPAS2Q99743 824 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 CPNE1Q99829 537 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 TXNRD2Q9NNW7 524 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.32□□□□□ -0.12
USH1C-201ENST00000005226 STK39Q9UEW8 545 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 ZDHHC2Q9UIJ5 367 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 FZD10Q9ULW2 581 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 BPTFQ12830 3046 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 TMEM233B4DJY2 109 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 PIGNO95427 931 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 ZNF286BP0CG31 522 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 PIM1P11309 404 aaPredicted RBP14.32□□□□□ -0.12
USH1C-201ENST00000005226 ZNF460Q14592 562 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 R3HDM1Q15032 1099 aaKnown RBP14.32□□□□□ -0.12
USH1C-201ENST00000005226 PDK1Q15118 436 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 PDCD2Q16342 344 aaPredicted RBP14.32□□□□□ -0.12
USH1C-201ENST00000005226 LRRC23Q53EV4 343 aaPredicted RBP14.32□□□□□ -0.12
USH1C-201ENST00000005226 KYQ8NBH2 561 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 CCDC28BQ9BUN5 200 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
USH1C-201ENST00000005226 MCM3APO60318 1980 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 CLDN5O00501 218 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 PEX1O43933 1283 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 TSPAN1O60635 241 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SRGAP2BP0DMP2 458 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SPRP35270 261 aaPredicted RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 GRIA4P48058 902 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SERPINB8P50452 374 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 ZNF423Q2M1K9 1284 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 MYLK3Q32MK0 819 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 CCDC153Q494R4 210 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SYPL2Q5VXT5 272 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 KLHDC10Q6PID8 442 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SLC26A9Q7LBE3 791 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 CTU1Q7Z7A3 348 aaKnown RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 SNX31Q8N9S9 440 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
USH1C-201ENST00000005226 TMA16Q96EY4 203 aaKnown RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 OMDQ99983 421 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 ILKAPQ9H0C8 392 aaPredicted RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 SUDS3Q9H7L9 328 aaPredicted RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 C20orf96Q9NUD7 363 aaPredicted RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 GNEQ9Y223 722 aaKnown RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 FIS1Q9Y3D6 152 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 ZCWPW2A0A1B0GU75 182 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 HNRNPRO43390 633 aaKnown RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 GRID2O43424 1007 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 THRAP10827 490 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 LIMK2P53671 638 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 XIAPP98170 497 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 VGLL4Q14135 290 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 ZFP28Q8NHY6 868 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 DGCR14Q96DF8 476 aaKnown RBP14.31□□□□□ -0.12
USH1C-201ENST00000005226 SGF29Q96ES7 293 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SCYL1Q96KG9 808 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 KLHL32Q96NJ5 620 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SEMA6AQ9H2E6 1030 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 KLK14Q9P0G3 267 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 HSFX1Q9UBD0 423 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 VANGL2Q9ULK5 521 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 SNX10Q9Y5X0 201 aa14.31□□□□□ -0.12
USH1C-201ENST00000005226 RGSL1A5PLK6 1076 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 MATN2O00339 956 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 ZBTB24O43167 697 aaPredicted RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 SBK3P0C264 359 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 TFEBP19484 476 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 USP46P62068 366 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 CYLC2Q14093 348 aaPredicted RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 GRM3Q14832 879 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 TBC1D25Q3MII6 688 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 BNC2Q6ZN30 1099 aaPredicted RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 HFE2Q6ZVN8 426 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 DRAXINQ8NBI3 349 aaPredicted RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 RNF169Q8NCN4 708 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 BTBD9Q96Q07 612 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 EIF2AQ9BY44 585 aaKnown RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 VPS33BQ9H267 617 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 PREBQ9HCU5 417 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 ANLNQ9NQW6 1124 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 BEST1O76090 585 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 ASLP04424 464 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms