RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Stx18Q8VDS8 334 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ppa2Q91VM9 330 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pgm1Q9D0F9 562 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ralgps2Q9ERD6 590 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Scamp5Q9JKD3 235 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Capn7Q9R1S8 813 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mtm1Q9Z2C5 603 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Kdelc2G5E897 503 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Casp8O89110 480 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 H2-Eb1P04230 264 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Enpp1P06802 906 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Oas1aP11928 367 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Il12bP43432 335 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 NcstnP57716 708 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ranbp9P69566 653 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Slc8a1P70414 970 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Eif4ebp2P70445 120 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 FerP70451 823 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Snx21Q3UR97 363 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Lrrc8bQ5DU41 803 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Serpinb1cQ5SV42 375 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ndrg1Q62433 394 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Htr1aQ64264 421 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Zfp512bQ6PHP4 879 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tas2r129Q7M709 320 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tmem202Q80W35 275 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tmem209Q8BRG8 561 aaKnown RBP13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Arhgap25Q8BYW1 648 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 LnpepQ8C129 1025 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Aph1bQ8C7N7 257 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 CherpQ8CGZ0 936 aaKnown RBP13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rmnd1Q8CI78 450 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Oas1gQ8K469 367 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mta1Q8K4B0 715 aaKnown RBP13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ttc39cQ8VE09 580 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Bbox1Q924Y0 387 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cdkn2aipnlQ9D211 116 aaKnown RBP13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dtwd1Q9D8U7 304 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Q9D979 236 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pak1ip1Q9DCE5 382 aaKnown RBP13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Vmn1r65Q9EPS7 332 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Smarcb1Q9Z0H3 385 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gm45861A0A1B0GRY3 1923 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gm14496K7N5U4 849 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Klra8Q60682 266 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Chn2Q80XD1 332 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ddhd1Q80YA3 547 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ctxn3Q8BXZ0 80 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Washc5Q8C2E7 1159 aaKnown RBP13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Samd3Q8C4H2 520 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Atg14Q8CDJ3 492 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Hmgcll1Q8JZS7 343 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Slc22a19Q8VCA0 551 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Nle1Q8VEJ4 485 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Barhl2Q8VIB5 384 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Wrnip1Q91XU0 660 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pcdhb13Q91Y06 796 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cttnbp2nlQ99LJ0 638 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Acot13Q9CQR4 140 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Hddc3Q9D114 179 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Taf7lQ9D3R9 471 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Actl7bQ9QY83 418 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 PodxlQ9R0M4 503 aa13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Noc2lQ9WV70 747 aaKnown RBP13.61□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cyp4a12bA2A974 508 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tbkbp1A2A9T0 611 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Fam166bA2AIP0 273 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rabgap1lA6H6A9 815 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Zscan5bB2RTN3 468 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Xpnpep3B7ZMP1 506 aaKnown RBP13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ccdc8D3YZV8 685 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mkrn2osD3Z393 217 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Vmn2r72D3Z4N8 856 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Olfr600E9PUN7 314 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gm8334F7CD45 553 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Vmn2r70K7N702 854 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tlx1P43345 332 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 PgfP49764 158 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 GemP55041 295 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Sppl2bQ3TD49 578 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mettl17Q3U2U7 461 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Prickle1Q3U5C7 832 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Grm5Q3UVX5 1203 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Abcd2Q61285 741 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Stx3Q64704 289 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 ScapQ6GQT6 1276 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rtl3Q6P1Y1 553 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Sort1Q6PHU5 825 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Maml1Q6T264 1020 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ccnt2Q7TQK0 723 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Olfr1128Q7TR47 311 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Smarcal1Q8BJL0 910 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Arhgap24Q8C4V1 747 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ano4Q8C5H1 955 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Smoc2Q8CD91 447 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ca9Q8VHB5 437 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Agap3Q8VHH5 910 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Sorcs3Q8VI51 1219 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cyp4a12aQ91WL5 508 aa13.6□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Stk33Q924X7 491 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 54.2 ms