RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Chek2Q9Z265 546 aa10.9□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Top3bQ9Z321 862 aaKnown RBP10.9□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Cntnap5aQ0V8T9 1304 aa10.9□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm281D3Z1Y0 860 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Kbtbd2G3X9X1 623 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Cbfa2t2O70374 594 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Sypl2O89104 264 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 AlplP09242 524 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tubgcp3P58854 905 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Sycp3P70281 254 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gdf3Q07104 366 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Cntn3Q07409 1028 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ccser2Q3UHI0 833 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ndst1Q3UHN9 882 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tmem26Q3UP23 366 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Aldh1a2Q62148 518 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Q8BGA7 448 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tbc1d10bQ8BHL3 798 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Pak5Q8C015 719 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nox1Q8CIZ9 591 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Prpf39Q8K2Z2 665 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Acad10Q8K370 1069 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 MyocdQ8VIM5 935 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Pdk3Q922H2 415 aaKnown RBP10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Dcp2Q9CYC6 422 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Dach1Q9QYB2 751 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nup210lQ9D2F7 1881 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mybpc1D3YU50 1127 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 NuggcD3YWJ0 796 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Plekha5E9Q6H8 1269 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Taf4E9QAP7 1042 aaKnown RBP10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Abhd12bG3UZN6 359 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gm10250G3X9L6 160 aaKnown RBP10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 JchainP01592 159 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 CblP22682 913 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 HmgcrQ01237 887 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Zbtb16Q3UQ17 673 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Sema4aQ62178 760 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Itga3Q62470 1053 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 CochQ62507 552 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Arhgap30Q640N3 1101 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Atp2a3Q64518 1038 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Scaf4Q6PFF0 1209 aaKnown RBP10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Jade1Q6ZPI0 834 aaKnown RBP10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Fam204aQ8C6C7 236 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 ItchQ8C863 864 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tma7Q8K003 64 aaKnown RBP10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Olfr809Q8VEX8 328 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PompQ9CQT5 141 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 AenQ9CZI9 336 aaKnown RBP10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Znf687Q9D2D7 1237 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Fam227bQ9D518 532 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Atp5hQ9DCX2 161 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Akr1c12Q9JLI0 323 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 MycsQ9Z304 431 aa10.89□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nfx1B1AY10 1114 aaKnown RBP10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Vmn2r19G5E8G4 854 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Rtn2O70622 471 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Grpel2O88396 224 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 En1P09065 401 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tgfb3P17125 410 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Wnt3aP27467 352 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tbxas1P36423 533 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Msx3P70354 204 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ikzf1Q03267 517 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Caprin2Q05A80 1031 aaKnown RBP10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Smyd5Q3TYX3 416 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 EmsyQ8BMB0 1264 aaKnown RBP10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Clic5Q8BXK9 251 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tbc1d13Q8R3D1 400 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Nup85Q8R480 656 aaKnown RBP10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 FtcdQ91XD4 541 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Pcdha6Q91Y14 946 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ndufaf1Q9CWX2 328 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Stap1Q9JM90 297 aaKnown RBP10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Egfl7Q9QXT5 275 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Sept6Q9R1T4 434 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ighv11-2A0A075B5R8 117 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Vmn2r121A2BE32 847 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Armt1A6H630 439 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Cyp2a22B2RXZ2 492 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 RxrgP28705 463 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Rab17P35292 214 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Atoh1P48985 351 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Vps45P97390 570 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 RnaselQ05921 735 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 4930430A15RikQ05AC5 485 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Gpd1lQ3ULJ0 351 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 PtprrQ62132 656 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Ino80dQ66JY2 873 aaKnown RBP10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Fbxw21Q8BI38 468 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Arhgap29Q8CGF1 1266 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mark4Q8CIP4 752 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Mkl1Q8K4J6 964 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Sec16bQ91XT4 1051 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Neurl2Q9D0S4 285 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 4930513O06RikQ9D549 161 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Bpifa3Q9D9J8 232 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Tmbim4Q9DA39 238 aa10.88□□□□□ -0.67
Ptcd1-201ENSMUST00000031628 Syde1Q9DBZ9 737 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms