RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 RPF1Q9H9Y2 349 aaKnown RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 PALMDQ9NP74 551 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 NDFIP2Q9NV92 336 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 STK39Q9UEW8 545 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 TCRBV9S1A1TA0A576 114 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ZSCAN5BA6NJL1 495 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 A8MU76 341 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ACKR2O00590 384 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 TRPA1O75762 1119 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 SULT1C4O75897 302 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 THRAP10827 490 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 CDK9P50750 372 aaKnown RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 CDH6P55285 790 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 YWHAGP61981 247 aaKnown RBP eCLIP12.74□□□□□ -0.37
LITAF-221ENST00000622633 FOLH1Q04609 750 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 PTPN11Q06124 597 aaPredicted RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 Q3C1V9 767 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ZNF829Q3KNS6 432 aaPredicted RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 FAM102AQ5T9C2 384 aaPredicted RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 EGFLAMQ63HQ2 1017 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 RIPOR1Q6ZS17 1223 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 TMC7Q7Z402 723 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ATP6V0D2Q8N8Y2 350 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ALKBH8Q96BT7 664 aaKnown RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 FAR2Q96K12 515 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ADPGKQ9BRR6 497 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 BCO2Q9BYV7 579 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 HEY2Q9UBP5 337 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 LCTP09848 1927 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 KBTBD13C9JR72 458 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 M0QYV0 167 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 EDNRBP24530 442 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 PGM1P36871 562 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 NUP107P57740 925 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 ZNF200P98182 395 aaPredicted RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 ROR1Q01973 937 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 TMCO4Q5TGY1 634 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 LBX2Q6XYB7 198 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 GALNT4Q8N4A0 578 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 MARVELD2Q8N4S9 558 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FAM172AQ8WUF8 416 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 DPF3Q92784 378 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 PEX13Q92968 403 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 TTC17Q96AE7 1141 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 NSL1Q96IY1 281 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FAM167AQ96KS9 214 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FAM111AQ96PZ2 611 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 TSSK1BQ9BXA7 367 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 CDH19Q9H159 772 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 CDT1Q9H211 546 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.73□□□□□ -0.37
LITAF-221ENST00000622633 IKBKGQ9Y6K9 419 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 KRBA1A5PL33 1030 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 LACTBL1A8MY62 500 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 H7C0C1 242 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 GPR25O00155 361 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 GRAP2O75791 330 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FAM155BO75949 473 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 ITGB3P05106 788 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 INHBAP08476 426 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 NAGAP17050 411 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 BGNP21810 368 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 ATP5OP48047 213 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 CLCN3P51790 818 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 ACTR3P61158 418 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 TLR1Q15399 786 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 CDO1Q16878 200 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 CYP4V2Q6ZWL3 525 aaPredicted RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 ZNF598Q86UK7 904 aaKnown RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 TRPM4Q8TD43 1214 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 DDI1Q8WTU0 396 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 LRRN4Q8WUT4 740 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 CFAP36Q96G28 342 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 PRR11Q96HE9 360 aaPredicted RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 TMEM176AQ96HP8 235 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 HEXIM2Q96MH2 286 aaKnown RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 GPR20Q99678 358 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 TRIM55Q9BYV6 548 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FZD8Q9H461 694 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 RSAD1Q9HA92 442 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 FANCEQ9HB96 536 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 ASNSD1Q9NWL6 643 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 TEX264Q9Y6I9 313 aa12.73□□□□□ -0.37
LITAF-221ENST00000622633 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
LITAF-221ENST00000622633 IGKV6-21A0A0C4DH24 114 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 IQANK1A0A1B0GTG1 560 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 MYOCOSA0A1B0GUC4 107 aa12.72□□□□□ -0.37
LITAF-221ENST00000622633 C2orf71A6NGG8 1288 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms