RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 A0A0D9SEW6 157 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 C4orf47A7E2U8 309 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 E9PAM4 449 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 K7ERQ8 282 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 RNF103O00237 685 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 CDX4O14627 284 aaPredicted RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 ZBTB24O43167 697 aaPredicted RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 NDUFS2O75306 463 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 MT-CO1P00395 513 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 SERPINC1P01008 464 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 IGLV3-19P01714 112 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 ASLP04424 464 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 SKILP12757 684 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 FERP16591 822 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 FANCCQ00597 558 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 BYSLQ13895 437 aaKnown RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 NR1I3Q14994 352 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 POM121L1PQ3SYA9 428 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 C5orf22Q49AR2 442 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 PEAR1Q5VY43 1037 aaPredicted RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 LAYNQ6UX15 382 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 LINGO4Q6UY18 593 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 SLC36A4Q6YBV0 504 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 ZNF571Q7Z3V5 609 aaPredicted RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 SYT12Q8IV01 421 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 MMAAQ8IVH4 418 aaKnown RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 CCDC117Q8IWD4 279 aaPredicted RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 PYROXD2Q8N2H3 581 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 STK40Q8N2I9 435 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 MSANTD4Q8NCY6 345 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 OR7D4Q8NG98 312 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 FRS2Q8WU20 508 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 FAM172AQ8WUF8 416 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 FAM129BQ96TA1 746 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 FEM1AQ9BSK4 669 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 TRIM7Q9C029 511 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 RSPH9Q9H1X1 276 aaPredicted RBP12.94□□□□□ -0.34
CBX1-206ENST00000581003 NDFIP2Q9NV92 336 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 RRN3Q9NYV6 651 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 ZNF212Q9UDV6 495 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 DAAM1Q9Y4D1 1078 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 ACTL7AQ9Y615 435 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 NUP205Q92621 2012 aa12.94□□□□□ -0.34
CBX1-206ENST00000581003 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 RALGAPA1Q6GYQ0 2036 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 PCDH15Q96QU1 1955 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 DRGXA6NNA5 263 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 TM4SF5O14894 197 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 KHNYNO15037 678 aaKnown RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 MID1O15344 667 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 CCP110O43303 1012 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ENDOD1O94919 500 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ACADMP11310 421 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 KRT3P12035 628 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ENGP17813 658 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 SDC4P31431 198 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 PBX1P40424 430 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 PSMD8P48556 350 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ST8SIA6P61647 398 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ZNF177Q13360 481 aaPredicted RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 ASIC2Q16515 512 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 TTC39BQ5VTQ0 682 aaPredicted RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 DCAF12L1Q5VU92 463 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ZNF776Q68DI1 518 aaPredicted RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 WDR59Q6PJI9 974 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 Q6ZVU0 165 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 SND1Q7KZF4 910 aaKnown RBP eCLIP12.93□□□□□ -0.34
CBX1-206ENST00000581003 METTL3Q86U44 580 aaKnown RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 AADATQ8N5Z0 425 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 ZNF419Q96HQ0 510 aaPredicted RBP12.93□□□□□ -0.34
CBX1-206ENST00000581003 RTKNQ9BST9 563 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 MUC3BQ9H195 1237 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 HAUS4Q9H6D7 363 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 VPS28Q9UK41 221 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 TBC1D30Q9Y2I9 924 aa12.93□□□□□ -0.34
CBX1-206ENST00000581003 CACNA1AO00555 2505 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 A0A1W2PP55 124 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 A0A1W2PQC6 194 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 MEI4A8MW99 385 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 DDX3XO00571 662 aaKnown RBP eCLIP12.92□□□□□ -0.341e-9■■■■■ 31.6
CBX1-206ENST00000581003 GIPC1O14908 333 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 SMAD6O43541 496 aaKnown RBP12.92□□□□□ -0.34
CBX1-206ENST00000581003 CLDN11O75508 207 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 MOCS3O95396 460 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 F9P00740 461 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 RHOCP08134 193 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
CBX1-206ENST00000581003 GPD1P21695 349 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 PTPN9P43378 593 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 PLK1P53350 603 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 CDH4P55283 916 aa12.92□□□□□ -0.34
CBX1-206ENST00000581003 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
CBX1-206ENST00000581003 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms