RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 KATNA1O75449 491 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 DUSP28Q4G0W2 176 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 TREML2Q5T2D2 321 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 TMPRSS6Q8IU80 811 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 SPATA20Q8TB22 786 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 FAM120BQ96EK7 910 aaKnown RBP15.48■□□□□ 0.07
ITGB4-206ENST00000579662 C1QTNF7Q9BXJ2 289 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 OSGEPL1Q9H4B0 414 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 IL1RAPL1Q9NZN1 696 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 MORF4L1Q9UBU8 362 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 ACTL7BQ9Y614 415 aa15.48■□□□□ 0.07
ITGB4-206ENST00000579662 MAP3K13O43283 966 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 CPSF4O95639 269 aaKnown RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 TRMT11Q7Z4G4 463 aaKnown RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 OXNAD1Q96HP4 312 aaPredicted RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 ZYG11BQ9C0D3 744 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 NRDE2Q9H7Z3 1164 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 XPO1O14980 1071 aaKnown RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 TGFB1I1O43294 461 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 NME5P56597 212 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 ACOX1Q15067 660 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 PRAMEF19Q5SWL8 479 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 MTMR14Q8NCE2 650 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 HELQQ8TDG4 1101 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 DTNBP1Q96EV8 351 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 MIEF1Q9NQG6 463 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 COMMD8Q9NX08 183 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 M0R3G1 203 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 WDR47O94967 919 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 FAM110CQ1W6H9 321 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 LRP10Q7Z4F1 713 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 MSL3Q8N5Y2 521 aaKnown RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 VPS51Q9UID3 782 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 ST3GAL5Q9UNP4 418 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 GSNP06396 782 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 TBL3Q12788 808 aaKnown RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 MTSS1LQ765P7 747 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 PHF21BQ96EK2 531 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 PNMA8BQ9ULN7 279 aaPredicted RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 NCKAP1Q9Y2A7 1128 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 TNPO3Q9Y5L0 923 aaKnown RBP15.47■□□□□ 0.07
ITGB4-206ENST00000579662 PLIN4Q96Q06 1357 aa15.47■□□□□ 0.07
ITGB4-206ENST00000579662 UBOX5O94941 541 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 DGKAP23743 735 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 CLK1P49759 484 aaKnown RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 BBS12Q6ZW61 710 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 OR5B17Q8NGF7 314 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 GPR20Q99678 358 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 PRRG3Q9BZD7 231 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 SENP6Q9GZR1 1112 aaPredicted RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 MID1IP1Q9NPA3 183 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 SNX13Q9Y5W8 968 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 NID2Q14112 1375 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 FKTNO75072 461 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 GUCA1CO95843 209 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 PGK1P00558 417 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 HNRNPH1P31943 449 aaKnown RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 USP41Q3LFD5 358 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 FNDC3BQ53EP0 1204 aaKnown RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 ZC3H12AQ5D1E8 599 aaKnown RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 DDX20Q9UHI6 824 aaKnown RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 PARP4Q9UKK3 1724 aaKnown RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 TPST1O60507 370 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 BMP10O95393 424 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 UBTFL6P0CB48 400 aaPredicted RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 PSMB4P28070 264 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 RXRGP48443 463 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 DRG2P55039 364 aaKnown RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 CCDC85BQ15834 202 aaPredicted RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 WASHC2DQ5SRD0 308 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 LHX5Q9H2C1 402 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 ZNF229Q9UJW7 825 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 OR6C75A6NL08 312 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 E7ENQ6 273 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 BAIAP3O94812 1187 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 CAPZA2P47755 286 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 ECM1Q16610 540 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 C16orf59Q7L2K0 433 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 ZSWIM2Q8NEG5 633 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 NKX2-3Q8TAU0 364 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 CSGALNACT1Q8TDX6 532 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 CNBD2Q96M20 576 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 NLNQ9BYT8 704 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 FAM124BQ9H5Z6 455 aaPredicted RBP15.46■□□□□ 0.07
ITGB4-206ENST00000579662 NDUFA13Q9P0J0 144 aa15.46■□□□□ 0.07
ITGB4-206ENST00000579662 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.46■□□□□ 0.06
ITGB4-206ENST00000579662 SMARCB1Q12824 385 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 DEPDC1Q5TB30 811 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 NEPROQ6NW34 567 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 MAGEC3Q8TD91 643 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 ZNF75CPQ92670 426 aaPredicted RBP15.46■□□□□ 0.06
ITGB4-206ENST00000579662 INPP5DQ92835 1189 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 CATSPER2Q96P56 530 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 MMADHCQ9H3L0 296 aaPredicted RBP15.46■□□□□ 0.06
ITGB4-206ENST00000579662 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 TBC1D23Q9NUY8 699 aa15.46■□□□□ 0.06
ITGB4-206ENST00000579662 EPHB6O15197 1021 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms