RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PPANQ9NQ55 473 aaKnown RBP7.24□□□□□ -1.25
SMG1-215ENST00000568239 GKN1Q9NS71 199 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 COMMD8Q9NX08 183 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 NEU3Q9UQ49 428 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 INSL6Q9Y581 213 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TEX264Q9Y6I9 313 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 IKBKGQ9Y6K9 419 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 COL4A6Q14031 1691 aa7.24□□□□□ -1.25
SMG1-215ENST00000568239 TCRBV9S1A1TA0A576 114 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 C2orf78A6NCI8 922 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 TRDMT1O14717 391 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 COCHO43405 550 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 TLL1O43897 1013 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CNPP09543 421 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 ZDHHC11BP0C7U3 371 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CCNB1P14635 433 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CREB1P16220 341 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 HMGA1P17096 107 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 NFKB1P19838 968 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 TPSB2P20231 275 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 MDH1P40925 334 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 PAPOLAP51003 745 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 EPHB3P54753 998 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 GEMIN4P57678 1058 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 SKOR1P84550 965 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 RAB33AQ14088 237 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 TPSAB1Q15661 275 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 MANEALQ5VSG8 457 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 NUGGCQ68CJ6 796 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 DNAJB7Q7Z6W7 309 aaPredicted RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 DENND1CQ8IV53 801 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 AGGF1Q8N302 714 aaeCLIP7.23□□□□□ -1.25
SMG1-215ENST00000568239 LZTR1Q8N653 840 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 ANKRD42Q8N9B4 389 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 MCUQ8NE86 351 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 MICAL1Q8TDZ2 1067 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 IGSF8Q969P0 613 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PABPC5Q96DU9 382 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 TTLL2Q9BWV7 592 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 FRMD8Q9BZ67 464 aaPredicted RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 MCOLN1Q9GZU1 580 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 BRD8Q9H0E9 1235 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 XAB2Q9HCS7 855 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 MLXIPLQ9NP71 852 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PSD3Q9NYI0 1048 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 RABGEF1Q9UJ41 708 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 F5H5T6 163 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CXCL14O95715 111 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 OR1E1P30953 314 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 MSH2P43246 934 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 ITKQ08881 620 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 KBTBD12Q3ZCT8 623 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 ITPRIPL1Q6GPH6 555 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 ZNF534Q76KX8 674 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 OTOP3Q7RTS5 596 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 KDELC2Q7Z4H8 507 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 ARHGAP12Q8IWW6 846 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 LGI2Q8N0V4 545 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CYP2S1Q96SQ9 504 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CDK5RAP1Q96SZ6 601 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 PAFAH2Q99487 392 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PHACTR1Q9C0D0 580 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 ENTPD7Q9NQZ7 604 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 RBM22Q9NW64 420 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMG1-215ENST00000568239 IPO11Q9UI26 975 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 INSL5Q9Y5Q6 135 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 SLC4A7Q9Y6M7 1214 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 BRAFP15056 766 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CHN1P15882 459 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 MGAT1P26572 445 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 HOXC13P31276 330 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CD68P34810 354 aaPredicted RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 HTR7P34969 479 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 MAGEA6P43360 314 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 IFNAR2P48551 515 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 SLC11A2P49281 568 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PRPSAP1Q14558 356 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 LRRC14Q15048 493 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 KLHL38Q2WGJ6 581 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PPM1NQ8N819 430 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 OR52K1Q8NGK4 314 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 DYDC1Q8WWB3 177 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 TEKT5Q96M29 485 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 CYTH2Q99418 400 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 VAT1Q99536 393 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 TCF25Q9BQ70 676 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 RNF38Q9H0F5 515 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 SP110Q9HB58 689 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 IGSF9Q9P2J2 1179 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PSMC3IPQ9P2W1 217 aaPredicted RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 TRHDEQ9UKU6 1024 aa7.23□□□□□ -1.25
SMG1-215ENST00000568239 PRRC2BQ5JSZ5 2229 aaKnown RBP7.23□□□□□ -1.25
SMG1-215ENST00000568239 DOCK4Q8N1I0 1966 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 CHD7Q9P2D1 2997 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 DOCK6Q96HP0 2047 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TMEM120BA0PK00 339 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 LCHNA4D1U4 455 aa7.22□□□□□ -1.25
SMG1-215ENST00000568239 TGM5O43548 720 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms