RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 GLI1P08151 1106 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 KRT5P13647 590 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 CD58P19256 250 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 MMP8P22894 467 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PBLDP30039 288 aaPredicted RBP4.22□□□□□ -1.73
ZEB1-212ENST00000558655 HOXC12P31275 282 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 CYLC1P35663 651 aaPredicted RBP4.22□□□□□ -1.73
ZEB1-212ENST00000558655 CENPAP49450 140 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 EPHA5P54756 1037 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 HNRNPH2P55795 449 aaKnown RBP4.22□□□□□ -1.73
ZEB1-212ENST00000558655 GPM6BQ13491 265 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 GBX1Q14549 363 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PPP2R5DQ14738 602 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 CCDC85BQ15834 202 aaPredicted RBP4.22□□□□□ -1.73
ZEB1-212ENST00000558655 DUSP6Q16828 381 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 GOLGA7BQ2TAP0 167 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PPP1R26Q5T8A7 1209 aaPredicted RBP4.22□□□□□ -1.73
ZEB1-212ENST00000558655 SNX30Q5VWJ9 437 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 ALG1LQ6GMV1 187 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PM20D1Q6GTS8 502 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 DENND1BQ6P3S1 775 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 SHQ1Q6PI26 577 aaKnown RBP4.22□□□□□ -1.73
ZEB1-212ENST00000558655 MON1BQ7L1V2 547 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 ACOT1Q86TX2 421 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 DOCK4Q8N1I0 1966 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 TMEM35BQ8NCS4 154 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 ZMIZ2Q8NF64 920 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 ZNF461Q8TAF7 563 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 MAML1Q92585 1016 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 MRPL38Q96DV4 380 aaKnown RBP4.22□□□□□ -1.73
ZEB1-212ENST00000558655 CYFIP2Q96F07 1278 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PCED1BQ96HM7 432 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 MYRFLQ96LU7 910 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 SMOQ99835 787 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 EMILIN2Q9BXX0 1053 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 TMLHEQ9NVH6 421 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 NKIRAS2Q9NYR9 191 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 NAGPAQ9UK23 515 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 NEUROG3Q9Y4Z2 214 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 ASB3Q9Y575 518 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PCDHB9Q9Y5E1 797 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PCDHB5Q9Y5E4 795 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 PCDHGB5Q9Y5G0 923 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 USP3Q9Y6I4 520 aa4.22□□□□□ -1.73
ZEB1-212ENST00000558655 CHD5Q8TDI0 1954 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 COL4A2P08572 1712 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 A0A087X0T9 212 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 WDR27A2RRH5 827 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 NT5C1B-RDH14C9J2C7 533 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 PLOD2O00469 737 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 SART1O43290 800 aaKnown RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 BRINP1O60477 761 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 ATP2C2O75185 946 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 KRT1P04264 644 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 CALB1P05937 261 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 ADH1AP07327 375 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 HNRNPA1P09651 372 aaKnown RBP eCLIP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 TMEM253P0C7T8 217 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 FAM228BP0C875 321 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 MYOGP15173 224 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 ATF2P15336 505 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 WEE1P30291 646 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 SOX9P48436 509 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 TUFMP49411 452 aaKnown RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 ERVFC1P60507 584 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 RPL10AP62906 217 aaKnown RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 GABPB1Q06547 395 aaPredicted RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 SP140Q13342 867 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 LAPTM5Q13571 262 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 ZNF268Q14587 947 aaPredicted RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 CASP8Q14790 479 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 LLGL1Q15334 1064 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 PLA2G4EQ3MJ16 856 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 MDH1BQ5I0G3 518 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 SPOUT1Q5T280 376 aaKnown RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 OLFML1Q6UWY5 402 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 CLEC20AQ6ZU45 233 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 BHLHA9Q7RTU4 235 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 BNIPLQ7Z465 357 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 HASPINQ8TF76 798 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 MCRS1Q96EZ8 462 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 SHDQ96IW2 340 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 HEXIM2Q96MH2 286 aaKnown RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 LRRC1Q9BTT6 524 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 DMAP1Q9NPF5 467 aaPredicted RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 TRPV5Q9NQA5 729 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 TCF7L2Q9NQB0 619 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 DZANK1Q9NVP4 752 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 PSD3Q9NYI0 1048 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 CYTH4Q9UIA0 394 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 TSPAN16Q9UKR8 245 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 STRIP2Q9ULQ0 834 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 MTF2Q9Y483 593 aaPredicted RBP4.21□□□□□ -1.73
ZEB1-212ENST00000558655 PCDHA13Q9Y5I0 950 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 SAR1BQ9Y6B6 198 aa4.21□□□□□ -1.73
ZEB1-212ENST00000558655 CEP290O15078 2479 aa4.21□□□□□ -1.74
ZEB1-212ENST00000558655 ARPC4-TTLL3A0A0A6YYG9 625 aa4.21□□□□□ -1.74
ZEB1-212ENST00000558655 EPOPA6NHQ4 379 aa4.21□□□□□ -1.74
ZEB1-212ENST00000558655 TEX28O15482 410 aa4.21□□□□□ -1.74
ZEB1-212ENST00000558655 ADAM12O43184 909 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms