RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	CCHCR1	Q8TD31	782 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	FGF14	Q92915	247 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	CYFIP2	Q96F07	1278 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	TMEM41A	Q96HV5	264 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	TMX3	Q96JJ7	454 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	MBOAT7	Q96N66	472 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	DMRTA2	Q96SC8	542 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	TEKT3	Q9BXF9	490 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	AGPAT5	Q9NUQ2	364 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	ZFP69B	Q9UJL9	534 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	PRG3	Q9Y2Y8	225 aa	Predicted RBP	6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	MTF2	Q9Y483	593 aa	Predicted RBP	6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	VPS13A	Q96RL7	3174 aa		6.63	□□□□□ -1.35
CPSF7-222	ENST00000544585	FANCM	Q8IYD8	2048 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	MYH9	P35579	1960 aa	Known RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585		A0A1W2PR48	441 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	OR14I1	A6ND48	311 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	MYO1F	O00160	1098 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	MSH4	O15457	936 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	ZBTB43	O43298	467 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	TADA2A	O75478	443 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	HOXA9	P31269	272 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	HOXA11	P31270	313 aa	Predicted RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	CNR2	P34972	360 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	RCAN1	P53805	252 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	SUMO3	P55854	103 aa	Predicted RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	DSC1	Q08554	894 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	DMWD	Q09019	674 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	DRP2	Q13474	957 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	NECTIN1	Q15223	517 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	CSRP2	Q16527	193 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	PFKFB3	Q16875	520 aa	Predicted RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	KHDC1L	Q5JSQ8	128 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	MIER3	Q7Z3K6	550 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	GRASP	Q7Z6J2	395 aa	Predicted RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	RAB11FIP4	Q86YS3	637 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	HACE1	Q8IYU2	909 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	BRIX1	Q8TDN6	353 aa	Known RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	SNX33	Q8WV41	574 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	HOXB13	Q92826	284 aa	Predicted RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	FGF13	Q92913	245 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	INTS4	Q96HW7	963 aa	Known RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	MRGPRX4	Q96LA9	322 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	WDR92	Q96MX6	357 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	WDCP	Q9H6R7	721 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	PIH1D1	Q9NWS0	290 aa	Known RBP	6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	MARCH5	Q9NX47	278 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	KLHL14	Q9P2G3	628 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	ANGPTL2	Q9UKU9	493 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	CTNND2	Q9UQB3	1225 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	MYO15A	Q9UKN7	3530 aa		6.62	□□□□□ -1.35
CPSF7-222	ENST00000544585	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	ARL5C	A6NH57	179 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	B4GALT3	O60512	393 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	ECI2	O75521	394 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PSMD10	O75832	226 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	STBD1	O95210	358 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	IL18BP	O95998	194 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	MAL	P21145	153 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	CD72	P21854	359 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	ADCY8	P40145	1251 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	MAPK9	P45984	424 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	SLC6A9	P48067	706 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PSMC5	P62195	406 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	FZD5	Q13467	585 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PMS2P11	Q13670	270 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	MST1L	Q2TV78	715 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	ARL13B	Q3SXY8	428 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585		Q4G0T1	1027 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PPM1L	Q5SGD2	360 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	UBXN11	Q5T124	520 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PHF19	Q5T6S3	580 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	LIN9	Q5TKA1	542 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	LRCH2	Q5VUJ6	765 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	FUT10	Q6P4F1	479 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PDXDC1	Q6P996	788 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585		Q6ZVL8	140 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	OTUD6A	Q7L8S5	288 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PQLC1	Q8N2U9	271 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	STPG3	Q8N7X2	389 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	TCP11	Q8WWU5	503 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PRPF31	Q8WWY3	499 aa	Known RBP	6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PSPC1	Q8WXF1	523 aa	Known RBP	6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	CPA5	Q8WXQ8	436 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	LENG9	Q96B70	501 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	CCDC51	Q96ER9	411 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	NLRP4	Q96MN2	994 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	GAD1	Q99259	594 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	LRRC2	Q9BYS8	371 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	SLC6A17	Q9H1V8	727 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	ZHX3	Q9H4I2	956 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	PRMT8	Q9NR22	394 aa	Predicted RBP	6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	SEMA4G	Q9NTN9	838 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	MIOS	Q9NXC5	875 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	GDE1	Q9NZC3	331 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	CPNE7	Q9UBL6	633 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	FBXO10	Q9UK96	956 aa		6.61	□□□□□ -1.35
CPSF7-222	ENST00000544585	FBXO9	Q9UK97	447 aa	Predicted RBP	6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms