RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	AGAP3	Q96P47	875 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	NFKBIZ	Q9BYH8	718 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	SMARCAD1	Q9H4L7	1026 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	GTF2IRD1	Q9UHL9	959 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	NME7	Q9Y5B8	376 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	RGSL1	A5PLK6	1076 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	CFLAR	O15519	480 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	CRTAM	O95727	393 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	TFAP2A	P05549	437 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	MSX2	P35548	267 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	MAGEA12	P43365	314 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	RANBP1	P43487	201 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	THOP1	P52888	689 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	LIMK2	P53671	638 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	TTLL12	Q14166	644 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	ADGRE1	Q14246	886 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	TREML2	Q5T2D2	321 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	ZNF567	Q8N184	647 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	OR6B3	Q8NGW1	331 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	KLRG1	Q96E93	195 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	MOCOS	Q96EN8	888 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	GATA5	Q9BWX5	397 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	ACSS2	Q9NR19	701 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	RAB26	Q9ULW5	256 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	PCDHGB4	Q9UN71	923 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	AKT3	Q9Y243	479 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	PCDHGB5	Q9Y5G0	923 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	AP4B1	Q9Y6B7	739 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	ZNF638	Q14966	1978 aa	Known RBP	13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	LTF	P02788	710 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	XRCC1	P18887	633 aa	Predicted RBP	13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	MPST	P25325	297 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	RPS12	P25398	132 aa	Known RBP	13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	ADORA2B	P29275	332 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	PID1	Q7Z2X4	250 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	ISL2	Q96A47	359 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	AGAP2	Q99490	1192 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	LRRC40	Q9H9A6	602 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	NMRAL1	Q9HBL8	299 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	PTTG2	Q9NZH5	202 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	GJA3	Q9Y6H8	435 aa		13.21	□□□□□ -0.3
DDX11-223	ENST00000542838	PDLIM1	O00151	329 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	PPEF2	O14830	753 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	VILL	O15195	856 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	USP12	O75317	370 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	C22orf31	O95567	290 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	ASL	P04424	464 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	MPO	P05164	745 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	CHRNG	P07510	517 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	ATP6V1B1	P15313	513 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	NUMB	P49757	651 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	CYLC2	Q14093	348 aa	Predicted RBP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	LSM12	Q3MHD2	195 aa	Known RBP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	PABPC1L	Q4VXU2	614 aa	Known RBP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	USP13	Q92995	863 aa	Predicted RBP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	DPEP3	Q9H4B8	488 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	APPL1	Q9UKG1	709 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	FZD10	Q9ULW2	581 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	HCRT	O43612	131 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	PGK2	P07205	417 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	ENO3	P13929	434 aa	Predicted RBP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	EPHA3	P29320	983 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	GLUD2	P49448	558 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	PKNOX1	P55347	436 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	KYAT1	Q16773	422 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	ZNF423	Q2M1K9	1284 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	NADK2	Q4G0N4	442 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	CATSPER1	Q8NEC5	780 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	RP9	Q8TA86	221 aa	Known RBP	13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	URGCP	Q8TCY9	931 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	CNKSR2	Q8WXI2	1034 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	RCN3	Q96D15	328 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	GRIP2	Q9C0E4	1043 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	SPATC1L	Q9H0A9	340 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	PRDM12	Q9H4Q4	367 aa		13.2	□□□□□ -0.3
DDX11-223	ENST00000542838	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	AMH	P03971	560 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	VTN	P04004	478 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	C2	P06681	752 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	SRGAP2B	P0DMP2	458 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	SULT1E1	P49888	294 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	SLC26A2	P50443	739 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	ATXN3	P54252	364 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	PDK1	Q15118	436 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	ZFP1	Q6P2D0	407 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	IYD	Q6PHW0	289 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	METTL25	Q8N6Q8	603 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	RNF148	Q8N7C7	305 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	MRPS26	Q9BYN8	205 aa	Known RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	R3HDML	Q9H3Y0	253 aa		13.19	□□□□□ -0.3
DDX11-223	ENST00000542838	TMPRSS4	Q9NRS4	437 aa		13.19	□□□□□ -0.3

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