RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ITGA3P26006 1051 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 PTGER4P35408 488 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 ART1P52961 327 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 EXOSC10Q01780 885 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 CENPCQ03188 943 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 OVGP1Q12889 678 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 MAPK7Q13164 816 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 LBRQ14739 615 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 C16orf72Q14CZ0 275 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 PPP2R5AQ15172 486 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 NR0B2Q15466 257 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 CST6Q15828 149 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 TTC31Q49AM3 519 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 SNX30Q5VWJ9 437 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 VSTM1Q6UX27 236 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 LINGO4Q6UY18 593 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 SYT2Q8N9I0 419 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 OR14C36Q8NHC7 312 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 CXorf38Q8TB03 319 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 UCMAQ8WVF2 138 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 PTPRN2Q92932 1015 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 KLHDC7BQ96G42 594 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 AIFM3Q96NN9 605 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 FAM129BQ96TA1 746 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 TCEAL2Q9H3H9 227 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 FZD3Q9NPG1 666 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 OSER1Q9NX31 292 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 PNMA8BQ9ULN7 279 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 RBM8AQ9Y5S9 174 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 MRPS18BQ9Y676 258 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 KLF18A0A0U1RQI7 1052 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 A0A1B0GTH6 734 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC12A8A0AV02 714 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 MKRN2OSH3BPM6 223 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC16A4O15374 487 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 LRRTM2O43300 516 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 CCNT1O60563 726 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 PPP6R2O75170 966 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 GCATO75600 419 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 IGHA1P01876 353 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 PRLRP16471 622 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 KLK2P20151 261 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 MX2P20592 715 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 F8A1P23610 371 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 PAX3P23760 479 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 CD82P27701 267 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 HLA-FP30511 346 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 DRD3P35462 400 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 CLDN2P57739 230 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 RNASE9P60153 205 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 FZD2Q14332 565 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 STAT4Q14765 748 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 EIF4HQ15056 248 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 ARHGAP44Q17R89 818 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 TGIF2LYQ8IUE0 185 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 MMAAQ8IVH4 418 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 CACNA2D3Q8IZS8 1091 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 BLIDQ8IZY5 108 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 SDR16C5Q8N3Y7 309 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 IL22RA1Q8N6P7 574 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 KBTBD7Q8WVZ9 684 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 KLK6Q92876 244 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 FAM131CQ96AQ9 280 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 ARSGQ96EG1 525 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 PCED1BQ96HM7 432 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 IFT74Q96LB3 600 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 C8orf48Q96LL4 319 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 DUSP23Q9BVJ7 150 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 TRIM55Q9BYV6 548 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 SPRY4Q9C004 299 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 LNPKQ9C0E8 428 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 STRADBQ9C0K7 418 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 CDH19Q9H159 772 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 MAGEC2Q9UBF1 373 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 SALL4Q9UJQ4 1053 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 FZD4Q9ULV1 537 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 NCKAP1Q9Y2A7 1128 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 RYR3Q15413 4870 aa7.07□□□□□ -1.28
CTNNA1-216ENST00000519489 NBEAL2Q6ZNJ1 2754 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3DA0A087WVF3 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3IA0A087WXS9 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3EA0A087X179 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3KA0A087X1G2 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3FA6NER0 549 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3LB9A6J9 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC27A2O14975 620 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 CLDN3O15551 220 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 KCNAB3O43448 404 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 RPLP0P05388 317 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3HP0C7X1 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 BPIP17213 487 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 HNRNPH3P31942 346 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC8A1P32418 973 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 FGL2Q14314 439 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 SOWAHAQ2M3V2 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 C9orf64Q5T6V5 341 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms