RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 HOXB9P17482 250 aaPredicted RBP5.92□□□□□ -1.46
CHD1-209ENST00000512844 KCNJ4P48050 445 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 CCT4P50991 539 aaKnown RBP5.92□□□□□ -1.46
CHD1-209ENST00000512844 PRKAA2P54646 552 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 PMPCAQ10713 525 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 C6orf10Q5SRN2 563 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 PTGR2Q8N8N7 351 aaPredicted RBP5.92□□□□□ -1.46
CHD1-209ENST00000512844 ANKRD42Q8N9B4 389 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 ATP2A3Q93084 1043 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 SDCCAG3Q96C92 435 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 NPAS1Q99742 590 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 CLPBQ9H078 707 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 THSD1Q9NS62 852 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 HEY2Q9UBP5 337 aa5.92□□□□□ -1.46
CHD1-209ENST00000512844 SETD1BQ9UPS6 1966 aaKnown RBP5.92□□□□□ -1.46
CHD1-209ENST00000512844 COL3A1P02461 1466 aaPredicted RBP5.91□□□□□ -1.46
CHD1-209ENST00000512844 TMEM247A6NEH6 219 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 HLA-DQA2P01906 255 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 DHRS4L1P0CG22 281 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 TNNT1P13805 278 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 PKMP14618 531 aaKnown RBP5.91□□□□□ -1.46
CHD1-209ENST00000512844 ADD2P35612 726 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 PAPOLAP51003 745 aaKnown RBP5.91□□□□□ -1.46
CHD1-209ENST00000512844 CYP2J2P51589 502 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 CUL4BQ13620 913 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 GXYLT1Q4G148 440 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 MDGA2Q7Z553 956 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 VPS52Q8N1B4 723 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 TMEM57Q8N5G2 664 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 CSGALNACT1Q8TDX6 532 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 SCARB1Q8WTV0 552 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 ZNF419Q96HQ0 510 aaPredicted RBP5.91□□□□□ -1.46
CHD1-209ENST00000512844 SCLT1Q96NL6 688 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 TASP1Q9H6P5 420 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 CHODLQ9H9P2 273 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 G6PC2Q9NQR9 355 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 FBXO4Q9UKT5 387 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 SUFUQ9UMX1 484 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 COG5Q9UP83 839 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 LZTS1Q9Y250 596 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 DTX4Q9Y2E6 619 aa5.91□□□□□ -1.46
CHD1-209ENST00000512844 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.91□□□□□ -1.46
CHD1-209ENST00000512844 TRBV5-3A0A0A0MS03 114 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 H3BNX3 289 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 HALP42357 657 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 NR4A2P43354 598 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 ACTR2P61160 394 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 ZRSR2Q15696 482 aaKnown RBP5.9□□□□□ -1.46
CHD1-209ENST00000512844 INPP5JQ15735 1006 aaPredicted RBP5.9□□□□□ -1.46
CHD1-209ENST00000512844 SMAD1Q15797 465 aaKnown RBP5.9□□□□□ -1.46
CHD1-209ENST00000512844 SMTNL2Q2TAL5 461 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 KIAA1755Q5JYT7 1200 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 SLC30A9Q6PML9 568 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 COLCA1Q6ZS62 124 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 CCDC25Q86WR0 208 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 C2CD5Q86YS7 1000 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 FAM185AQ8N0U4 392 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 MMP21Q8N119 569 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 ANKRD44Q8N8A2 993 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 NRACQ8N912 160 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 IFT27Q9BW83 186 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 TXNRD2Q9NNW7 524 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 MSRB1Q9NZV6 116 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 RRP7AQ9Y3A4 280 aaKnown RBP5.9□□□□□ -1.46
CHD1-209ENST00000512844 PKP3Q9Y446 797 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 SQORQ9Y6N5 450 aa5.9□□□□□ -1.46
CHD1-209ENST00000512844 KCNJ18B7U540 433 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 IGKV2-30P06310 120 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 CYP4B1P13584 511 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 VEGFAP15692 232 aaPredicted RBP5.89□□□□□ -1.47
CHD1-209ENST00000512844 RXRAP19793 462 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 PRPH2P23942 346 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 PNPLA4P41247 253 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 RPS6KA3P51812 740 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 ARL4CP56559 192 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 DCTN1Q14203 1278 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 TAF5Q15542 800 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 EPHA10Q5JZY3 1008 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 FAM171A1Q5VUB5 890 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 KIAA1324Q6UXG2 1013 aaKnown RBP5.89□□□□□ -1.47
CHD1-209ENST00000512844 FTSJ3Q8IY81 847 aaKnown RBP5.89□□□□□ -1.47
CHD1-209ENST00000512844 DPP10Q8N608 796 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 MORC4Q8TE76 937 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 IP6K1Q92551 441 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 WDR83Q9BRX9 315 aaKnown RBP5.89□□□□□ -1.47
CHD1-209ENST00000512844 ABHD16BQ9H3Z7 469 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 FZD3Q9NPG1 666 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 DERAQ9Y315 318 aa5.89□□□□□ -1.47
CHD1-209ENST00000512844 IGLV5-39A0A0G2JS06 123 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 FOXO6A8MYZ6 492 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 TLX3O43711 291 aaPredicted RBP5.88□□□□□ -1.47
CHD1-209ENST00000512844 TK1P04183 234 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 CHN1P15882 459 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 KLRC2P26717 231 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 SRSF1Q07955 248 aaKnown RBP eCLIP5.88□□□□□ -1.47
CHD1-209ENST00000512844 TWIST1Q15672 202 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 LRRC24Q50LG9 513 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 HMBOX1Q6NT76 420 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 TMEM199Q8N511 208 aa5.88□□□□□ -1.47
CHD1-209ENST00000512844 NKAPQ8N5F7 415 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms