RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 PHF13Q86YI8 300 aaPredicted RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 VSTM4Q8IW00 320 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 PJA1Q8NG27 643 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SH3RF2Q8TEC5 729 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 NELL1Q92832 810 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 C18orf8Q96DM3 657 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 CHFRQ96EP1 664 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 PGAP3Q96FM1 320 aaPredicted RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 SLC39A13Q96H72 371 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 MRFAP1L1Q96HT8 127 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SPACA7Q96KW9 195 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 NOX5Q96PH1 765 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SLC2A13Q96QE2 648 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 NELL2Q99435 816 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 DNAJC7Q99615 494 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 AGPAT1Q99943 283 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 RSRP1Q9BUV0 290 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 TRIM62Q9BVG3 475 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 BHLHE41Q9C0J9 482 aaPredicted RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 GKN1Q9NS71 199 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 THG1LQ9NWX6 298 aaKnown RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 RRN3Q9NYV6 651 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 TBC1D14Q9P2M4 693 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 TMEM59LQ9UK28 342 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 FBXO10Q9UK96 956 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 NENFQ9UMX5 172 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 CPQQ9Y646 472 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 ANAPC1Q9H1A4 1944 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 ZNF638Q14966 1978 aaKnown RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 OTOL1A6NHN0 477 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 LRRC53A6NM62 1247 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 SLC9A3R1O14745 358 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 ZNF263O14978 683 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 STC2O76061 302 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 KLKB1P03952 638 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 ERBB2P04626 1255 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 ITPKAP23677 461 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 RGS7P49802 495 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 KPNA1P52294 538 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 LIMK1P53667 647 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 RUNX3Q13761 415 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 MTF1Q14872 753 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 CLEC16AQ2KHT3 1053 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 GAB4Q2WGN9 574 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 SFMBT2Q5VUG0 894 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 BTBD8Q5XKL5 378 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 ACAD10Q6JQN1 1059 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 FOXR1Q6PIV2 292 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 WDR59Q6PJI9 974 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 CACNA2D4Q7Z3S7 1137 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 ZNF571Q7Z3V5 609 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 RALGPS2Q86X27 583 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 XYLT1Q86Y38 959 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 SIX6OS1Q8N1H7 587 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 OR8K1Q8NGG5 319 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 CLEC4CQ8WTT0 213 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 SLC20A1Q8WUM9 679 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 NDRG1Q92597 394 aaKnown RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 CLDN23Q96B33 292 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 HHIPQ96QV1 700 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 KXD1Q9BQD3 176 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 ISCUQ9H1K1 167 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 LINC00597Q9H2U6 94 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 SLITRK6Q9H5Y7 841 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 C8orf33Q9H7E9 229 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 ZFYVE1Q9HBF4 777 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 POPDC2Q9HBU9 364 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 HPS4Q9NQG7 708 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 WDR35Q9P2L0 1181 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 TJP2Q9UDY2 1190 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 NAGPAQ9UK23 515 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 RAB23Q9ULC3 237 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 ZNF510Q9Y2H8 683 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 LUC7L2Q9Y383 392 aaKnown RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 HBS1LQ9Y450 684 aaKnown RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 MTF2Q9Y483 593 aaPredicted RBP7.01□□□□□ -1.29
VPS52-219ENST00000493379 CEP83Q9Y592 693 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 F5P12259 2224 aa7.01□□□□□ -1.29
VPS52-219ENST00000493379 SSU72P8A0A1W2PR75 194 aa7□□□□□ -1.29
VPS52-219ENST00000493379 METTL12A8MUP2 240 aa7□□□□□ -1.29
VPS52-219ENST00000493379 KCNU1A8MYU2 1149 aa7□□□□□ -1.29
VPS52-219ENST00000493379 J3QW42 95 aa7□□□□□ -1.29
VPS52-219ENST00000493379 DDX3XO00571 662 aaKnown RBP eCLIP7□□□□□ -1.29
VPS52-219ENST00000493379 MAN2B1O00754 1011 aa7□□□□□ -1.29
VPS52-219ENST00000493379 TRDMT1O14717 391 aaKnown RBP7□□□□□ -1.29
VPS52-219ENST00000493379 HSF2BPO75031 334 aa7□□□□□ -1.29
VPS52-219ENST00000493379 LRP3O75074 770 aa7□□□□□ -1.29
VPS52-219ENST00000493379 FBXO24O75426 580 aa7□□□□□ -1.29
VPS52-219ENST00000493379 NTRK1P04629 796 aa7□□□□□ -1.29
VPS52-219ENST00000493379 SERPING1P05155 500 aa7□□□□□ -1.29
VPS52-219ENST00000493379 CKMP06732 381 aa7□□□□□ -1.29
VPS52-219ENST00000493379 MBL2P11226 248 aaPredicted RBP7□□□□□ -1.29
VPS52-219ENST00000493379 LCP1P13796 627 aa7□□□□□ -1.29
VPS52-219ENST00000493379 GDI1P31150 447 aa7□□□□□ -1.29
VPS52-219ENST00000493379 DNAJA1P31689 397 aaKnown RBP7□□□□□ -1.29
VPS52-219ENST00000493379 CASP14P31944 242 aa7□□□□□ -1.29
VPS52-219ENST00000493379 EIF2DP41214 584 aaKnown RBP7□□□□□ -1.29
VPS52-219ENST00000493379 MATKP42679 507 aa7□□□□□ -1.29
VPS52-219ENST00000493379 CCR10P46092 362 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms