RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 CFAP97Q9P2B7 532 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 KLHL8Q9P2G9 620 aaPredicted RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 PPARGC1AQ9UBK2 798 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 AGO1Q9UL18 857 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 TPX2Q9ULW0 747 aaKnown RBP7.1□□□□□ -1.27
PDAP1-203ENST00000488214 SHOC2Q9UQ13 582 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 TTLL3Q9Y4R7 772 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 KIAA1549LQ6ZVL6 1849 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 MYOFQ9NZM1 2061 aa7.1□□□□□ -1.27
PDAP1-203ENST00000488214 CCDC195A0A1B0GUA6 201 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 A0A1B0GVM2 712 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 TCAF2A6NFQ2 919 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ARHGAP42A6NI28 874 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 WASH4PA8MWX3 477 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RASA4BC9J798 803 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 E7EVH7 732 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 GOLGA8MH3BSY2 632 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RASA4O43374 803 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 OPHN1O60890 802 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RAMP2O60895 175 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ZNF189O75820 626 aaPredicted RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 SASH3O75995 380 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 NEBLO76041 1014 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 TMEM63AO94886 807 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 LATS1O95835 1130 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RHOCP08134 193 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 POU2F2P09086 479 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ITIH2P19823 946 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 PTPN3P26045 913 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 IVDP26440 423 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 STIP1P31948 543 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 BMP8BP34820 402 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 CHKAP35790 457 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 MAPKAPK2P49137 400 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 LMAN1P49257 510 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RPS24P62847 133 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 FAM193AP78312 1265 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 DHX9Q08211 1270 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ZBTB17Q13105 803 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 MORF4L2Q15014 288 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 PRSS36Q5K4E3 855 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RARS2Q5T160 578 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 SYCP2LQ5T4T6 812 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RNASEH2BQ5TBB1 312 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ANKRD22Q5VYY1 191 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 HIBCHQ6NVY1 386 aaPredicted RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 TMC5Q6UXY8 1006 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 Q6ZNB5 142 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 HDXQ7Z353 690 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 PCGF5Q86SE9 256 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ARHGAP12Q8IWW6 846 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 PPIL6Q8IXY8 311 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 LZTR1Q8N653 840 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 TSEN2Q8NCE0 465 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 VN1R2Q8NFZ6 395 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ADAMTS19Q8TE59 1207 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 SH3RF2Q8TEC5 729 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 UBLCP1Q8WVY7 318 aaPredicted RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 CPT1BQ92523 772 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 MRPL38Q96DV4 380 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 PWWP2AQ96N64 755 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RUFY1Q96T51 708 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 CDCA3Q99618 268 aaPredicted RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 SLC39A8Q9C0K1 460 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 BRD8Q9H0E9 1235 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 NSUN3Q9H649 340 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 SP110Q9HB58 689 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 USP29Q9HBJ7 922 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RAB6BQ9NRW1 208 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 DONSONQ9NYP3 566 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 RSPH14Q9UHP6 348 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 HPCAL4Q9UM19 191 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ARHGAP26Q9UNA1 814 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ATP8A1Q9Y2Q0 1164 aa7.09□□□□□ -1.27
PDAP1-203ENST00000488214 MRPS23Q9Y3D9 190 aaKnown RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 ZFP37Q9Y6Q3 630 aaPredicted RBP7.09□□□□□ -1.27
PDAP1-203ENST00000488214 DOCK8Q8NF50 2099 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 CDH23Q9H251 3354 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 RANBP2P49792 3224 aaKnown RBP7.08□□□□□ -1.28
PDAP1-203ENST00000488214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.08□□□□□ -1.28
PDAP1-203ENST00000488214 C5orf60A6NFR6 353 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 DRGXA6NNA5 263 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 LEFTY2O00292 366 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 ZNF197O14709 1029 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 CHADO15335 359 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 TP73O15350 636 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 TNRC18O15417 2968 aaPredicted RBP7.08□□□□□ -1.28
PDAP1-203ENST00000488214 MTSS1O43312 755 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 TBL1XO60907 577 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 MOSPD3O75425 235 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 GCATO75600 419 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 PRAMEF12O95522 483 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 APRTP07741 180 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 PFKLP17858 780 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 NFKB1P19838 968 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 PSMB4P28070 264 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 OR1E1P30953 314 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 FDFT1P37268 417 aa7.08□□□□□ -1.28
PDAP1-203ENST00000488214 HSPA9P38646 679 aaKnown RBP7.08□□□□□ -1.28
PDAP1-203ENST00000488214 PAPOLAP51003 745 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms