RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 HNF1BP35680 557 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 TNFSF9P41273 254 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 CTSKP43235 329 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 GRK6P43250 576 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 RPL10AP62906 217 aaKnown RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 TCERG1LQ5VWI1 586 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 C9orf57Q5W0N0 161 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 EGFLAMQ63HQ2 1017 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 WSCD1Q658N2 575 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 ERICH1Q86X53 443 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 METTL23Q86XA0 190 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 SLITRK4Q8IW52 837 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 DCP1BQ8IZD4 617 aaKnown RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 THEM5Q8N1Q8 247 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 TERB1Q8NA31 727 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 LEO1Q8WVC0 666 aaPredicted RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 FGF11Q92914 225 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 ERLEC1Q96DZ1 483 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 TMEM176AQ96HP8 235 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 SLC6A18Q96N87 628 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 HAPLN2Q9GZV7 340 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 GZF1Q9H116 711 aaPredicted RBP7.02□□□□□ -1.29
SMC4-217ENST00000485867 TMEM60Q9H2L4 133 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 BHMT2Q9H2M3 363 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 KMT5AQ9NQR1 393 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 IL17BQ9UHF5 180 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 PCDHGA1Q9Y5H4 931 aa7.02□□□□□ -1.29
SMC4-217ENST00000485867 A0A1B0GVT2 93 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 TBC1D3BA6NDS4 549 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 SLC16A4O15374 487 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CLDN3O15551 220 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 FAM189A1O60320 539 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 BRINP1O60477 761 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 ADRB2P07550 413 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 NCAM1P13591 858 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 PFKLP17858 780 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 BMP7P18075 431 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CYP2F1P24903 491 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 VIPR1P32241 457 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 ZNF165P49910 485 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 PDE6CP51160 858 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 ERVFRD-1P60508 538 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 TARDBPQ13148 414 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMC4-217ENST00000485867 MAPK7Q13164 816 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 TOB2Q14106 344 aaPredicted RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 KIR3DS1Q14943 382 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 NFE2Q16621 373 aaPredicted RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 TBC1D25Q3MII6 688 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 LY6G5CQ5SRR4 150 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 C10orf76Q5T2E6 689 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 HES3Q5TGS1 186 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 DCAF12L1Q5VU92 463 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 JADE1Q6IE81 842 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CPLX2Q6PUV4 134 aaKnown RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 KIAA1324Q6UXG2 1013 aaKnown RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 FSIP1Q8NA03 581 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 ENGASEQ8NFI3 743 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CADM4Q8NFZ8 388 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 MED8Q96G25 268 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 TOE1Q96GM8 510 aaKnown RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 MRGPRX1Q96LB2 322 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 SIGLEC10Q96LC7 697 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 DRC1Q96MC2 740 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 KCNC2Q96PR1 638 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 ACOX2Q99424 681 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 GPR174Q9BXC1 333 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 NT5C1AQ9BXI3 368 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 TRIM4Q9C037 500 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CCSER1Q9C0I3 900 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CNTD2Q9H8S5 307 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CPNE5Q9HCH3 593 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 ERVK13-1Q9NX77 482 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 SIRT5Q9NXA8 310 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 GFOD1Q9NXC2 390 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 WSB2Q9NYS7 404 aaPredicted RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 USP36Q9P275 1121 aaKnown RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 FTSJ1Q9UET6 329 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 GPR55Q9Y2T6 319 aaPredicted RBP7.01□□□□□ -1.29
SMC4-217ENST00000485867 SNX14Q9Y5W7 946 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 RAD54BQ9Y620 910 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 CPQQ9Y646 472 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 NBPF19A0A087WUL8 3843 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 ABCA12Q86UK0 2595 aa7.01□□□□□ -1.29
SMC4-217ENST00000485867 PLXNA2O75051 1894 aa7□□□□□ -1.29
SMC4-217ENST00000485867 TRIM24O15164 1050 aa7□□□□□ -1.29
SMC4-217ENST00000485867 HOXC11O43248 304 aaPredicted RBP7□□□□□ -1.29
SMC4-217ENST00000485867 PCDHGA12O60330 932 aa7□□□□□ -1.29
SMC4-217ENST00000485867 TRIM13O60858 407 aa7□□□□□ -1.29
SMC4-217ENST00000485867 HIP1RO75146 1068 aa7□□□□□ -1.29
SMC4-217ENST00000485867 TULP3O75386 442 aa7□□□□□ -1.29
SMC4-217ENST00000485867 ZNF205O95201 554 aa7□□□□□ -1.29
SMC4-217ENST00000485867 OLFM2O95897 454 aa7□□□□□ -1.29
SMC4-217ENST00000485867 KRT10P13645 584 aa7□□□□□ -1.29
SMC4-217ENST00000485867 XBP1P17861 261 aa7□□□□□ -1.29
SMC4-217ENST00000485867 PI3P19957 117 aa7□□□□□ -1.29
SMC4-217ENST00000485867 MUTP22033 750 aa7□□□□□ -1.29
SMC4-217ENST00000485867 ACTN2P35609 894 aa7□□□□□ -1.29
SMC4-217ENST00000485867 KRT2P35908 639 aa7□□□□□ -1.29
SMC4-217ENST00000485867 MATR3P43243 847 aaKnown RBP eCLIP7□□□□□ -1.297e-8■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms