RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
COL12A1-207ENST00000483888 RGS4P49798 205 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 NEK3P51956 506 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 TBX2Q13207 712 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-207ENST00000483888 USP17L6PQ6QN14 398 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 LINC00523Q86TU6 105 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 CYP4X1Q8N118 509 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 VANGL1Q8TAA9 524 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-207ENST00000483888 C12orf43Q96C57 262 aaKnown RBP10.43□□□□□ -0.74
COL12A1-207ENST00000483888 DIRAS2Q96HU8 199 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 OR2B2Q9GZK3 357 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 ABCB9Q9NP78 766 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 TRIM3O75382 744 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-207ENST00000483888 TIPRLO75663 272 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 RPL35P42766 123 aaKnown RBP10.43□□□□□ -0.74
COL12A1-207ENST00000483888 PRKAA2P54646 552 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 CDC16Q13042 620 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 DDX39BQ13838 428 aaKnown RBP10.43□□□□□ -0.74
COL12A1-207ENST00000483888 FAXDC2Q96IV6 333 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 BCL2L14Q9BZR8 327 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 CCNB1IP1Q9NPC3 277 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 BLOC1S4Q9NUP1 217 aa10.43□□□□□ -0.74
COL12A1-207ENST00000483888 NTRK1P04629 796 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 UGT2B4P06133 528 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 GNAO1P09471 354 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MSR1P21757 451 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PSMD5Q16401 504 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ANO7Q6IWH7 933 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 HERC6Q8IVU3 1022 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 GMCL1Q96IK5 515 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TMEM168Q9H0V1 697 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 NRP2O60462 931 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 RLN1P04808 185 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 CDH1P12830 882 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MAGEA12P43365 314 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 RBBP4Q09028 425 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 DCAF4L1Q3SXM0 396 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ANKRD23Q86SG2 305 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TMIEQ8NEW7 156 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 CIB1Q99828 191 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 BARHL2Q9NY43 387 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TM7SF2O76062 418 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MMP13P45452 471 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MAFIPQ8WZ33 124 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 CHCHD6Q9BRQ6 235 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 AKAP7Q9P0M2 348 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 INVSQ9Y283 1065 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PZPP20742 1482 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PDE2AO00408 941 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 H6PDO95479 791 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TFPTP0C1Z6 253 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PDGFRAP16234 1089 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 AZGP1P25311 298 aaKnown RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MSX2P35548 267 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 SKIV2LQ15477 1246 aaKnown RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TTC23LQ6PF05 361 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ZNF517Q6ZMY9 492 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 FITM2Q8N6M3 262 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 FNDC5Q8NAU1 212 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PHF21BQ96EK2 531 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TMEM260Q9NX78 707 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ERVK-11Q9UQG0 969 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ACTL7BQ9Y614 415 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 RAD54BQ9Y620 910 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 URB2Q14146 1524 aaKnown RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ZNF423Q2M1K9 1284 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 RNASE12Q5GAN4 147 aaKnown RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 FGD3Q5JSP0 725 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TMEM132CQ8N3T6 1108 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 TP53INP1Q96A56 240 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ARHGAP20Q9P2F6 1191 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PRKAB1Q9Y478 270 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MID1O15344 667 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 SERPINF2P08697 491 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ILF2Q12905 390 aaKnown RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MADCAM1Q13477 382 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 CCNG2Q16589 344 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ABCB5Q2M3G0 1257 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 USP49Q70CQ1 688 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 THNSL1Q8IYQ7 743 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ASIC4Q96FT7 647 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 Q96MT0 163 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 KATNAL1Q9BW62 490 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PTPRHQ9HD43 1115 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 WWOXQ9NZC7 414 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 SHOC2Q9UQ13 582 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 MYMKA6NI61 221 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 PLD2O14939 933 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 VAPBO95292 243 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 CST1P01037 141 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 RCAN1P53805 252 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 RFX4Q33E94 735 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ZNF615Q8N8J6 731 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
COL12A1-207ENST00000483888 REXO5Q96IC2 774 aaKnown RBP10.42□□□□□ -0.74
COL12A1-207ENST00000483888 CEP295NLQ96MC4 621 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms