RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 HNRNPABQ99729 332 aaKnown RBP12.52□□□□□ -0.41
SEMA3F-206ENST00000434342 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
SEMA3F-206ENST00000434342 TAS2R1Q9NYW7 299 aa12.52□□□□□ -0.41
SEMA3F-206ENST00000434342 MOSPD1Q9UJG1 213 aa12.52□□□□□ -0.41
SEMA3F-206ENST00000434342 A8MU76 341 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 B2RBV5 119 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 H3BRJ5 948 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 CLPTM1O96005 669 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 PGM1P36871 562 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 ALDH18A1P54886 795 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 AQP5P55064 265 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 CHSY1Q86X52 802 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 SIGLEC10Q96LC7 697 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 PGLYRP2Q96PD5 576 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 EBNA1BP2Q99848 306 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 HBS1LQ9Y450 684 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 IDO1P14902 403 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 ARL4AP40617 200 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 GRM5P41594 1212 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 POU5F1BQ06416 359 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 NME3Q13232 169 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 KYAT1Q16773 422 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 ATG16L1Q676U5 607 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 TTC39CQ8N584 583 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 ATXN7L3BQ96GX2 97 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 KCTD15Q96SI1 283 aaPredicted RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 MRPL1Q9BYD6 325 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 SNX25Q9H3E2 840 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 DTLQ9NZJ0 730 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 ZNF212Q9UDV6 495 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 MYO18AQ92614 2054 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 H3BSA7 217 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 RECQL4O94761 1208 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 S100BP04271 92 aaPredicted RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 F7P08709 466 aaPredicted RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 TKTP29401 623 aaKnown RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 HOXA11P31270 313 aaPredicted RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 SNX16P57768 344 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 CLPPQ16740 277 aaPredicted RBP12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 SFT2D3Q587I9 215 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 PACS1Q6VY07 963 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 CRLF3Q8IUI8 442 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 GPRC5AQ8NFJ5 357 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 PYDC1Q8WXC3 89 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 SLC7A5P2Q9GIP4 190 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 CNTN3Q9P232 1028 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 ANGPTL2Q9UKU9 493 aa12.51□□□□□ -0.41
SEMA3F-206ENST00000434342 SMIM31A0A1B0GVY4 71 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 MDM4O15151 490 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 ACAT1P24752 427 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 GMPRP36959 345 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 RABGGTBP53611 331 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 AQP4P55087 323 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PITX1P78337 314 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PKDCCQ504Y2 493 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PEX5LQ8IYB4 626 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 RAB3IL1Q8TBN0 382 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 FRMD8Q9BZ67 464 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 CEP350Q5VT06 3117 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 DNAH12Q6ZR08 3092 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 KANSL1LA0AUZ9 987 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 TRAFD1O14545 582 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 C1QAP02745 245 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 ENDOUP21128 410 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 KCNA4P22459 653 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PRKCHP24723 683 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 SLC5A2P31639 672 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 GTF2A2P52657 109 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 INAQ16352 499 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 MARCH8Q5T0T0 291 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 CES4AQ5XG92 561 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 DEFB106AQ8N104 65 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 GALNT4Q8N4A0 578 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 COLGALT1Q8NBJ5 622 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 SHKBP1Q8TBC3 707 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 HTR3CQ8WXA8 447 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 SKA1Q96BD8 255 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 C20orf27Q9GZN8 174 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PCDHGB4Q9UN71 923 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PCDHGB5Q9Y5G0 923 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 CLDN5O00501 218 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 DPYSL4O14531 572 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 TRMUO75648 421 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 RPL10AP62906 217 aaKnown RBP12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 STX3Q13277 289 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 PPIL2Q13356 520 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 OLIG2Q13516 323 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 MYLK3Q32MK0 819 aa12.5□□□□□ -0.41
SEMA3F-206ENST00000434342 FBXO47Q5MNV8 452 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms