RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NECTIN3Q9NQS3 549 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CNNM1Q9NRU3 951 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 DDX28Q9NUL7 540 aaKnown RBP5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 BLOC1S4Q9NUP1 217 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC39A1Q9NY26 324 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 KCND2Q9NZV8 630 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 EMC3Q9P0I2 261 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 CNTN3Q9P232 1028 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 VTI1BQ9UEU0 232 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 EBF1Q9UH73 591 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 ENPP5Q9UJA9 477 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNX7Q9UNH6 387 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 PLLPQ9Y342 182 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNX5Q9Y5X3 404 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 COMMD10Q9Y6G5 202 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 A3GALT2U3KPV4 340 aa5.73□□□□□ -1.49
VTI1BP4-201ENST00000427516 LTN1O94822 1766 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ATRNL1Q5VV63 1379 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PLIN4Q96Q06 1357 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TSPY2A6NKD2 308 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SFI1A8K8P3 1242 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PP2D1A8MPX8 630 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PDZK1P1A8MUH7 402 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 MEI4A8MW99 385 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANKRD63C9JTQ0 380 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 E7ESA3 106 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 F5H6K3 240 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PI4K2BG5E9Z4 385 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 H0YAE9 185 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TERTO14746 1132 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 YKT6O15498 198 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PAPSS1O43252 624 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SGTAO43765 313 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SH3BP5O60239 455 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 MRPS14O60783 128 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NOS1APO75052 506 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TMCC2O75069 709 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NDUFS2O75306 463 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRIM3O75382 744 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 KATNA1O75449 491 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNAPC5O75971 98 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NADKO95544 446 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ASS1P00966 412 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 HMGN1P05114 100 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 APOA4P06727 396 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 BPGMP07738 259 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CETPP11597 493 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 BMP2P12643 396 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NCAM1P13591 858 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NAGAP17050 411 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRKCAP17252 672 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 DDX5P17844 614 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 IL10P22301 178 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CFL1P23528 166 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 F8A1P23610 371 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 KLRC2P26717 231 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 GCAP28676 217 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 MZF1P28698 734 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCND2P30279 289 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ADSSP30520 456 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 L1CAMP32004 1257 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CRHR1P34998 444 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 GARSP41250 739 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NSFP46459 744 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 GABRB2P47870 512 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSMD8P48556 350 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NUDT2P50583 147 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARSEP51690 589 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NDST2P52849 883 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PPP5CP53041 499 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 KCNQ4P56696 695 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 B2MP61769 119 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 COPZ1P61923 177 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC25A3Q00325 362 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 OTUD4Q01804 1114 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 RHDQ02161 417 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF45Q02386 682 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ENPEPQ07075 957 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 BST1Q10588 318 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 BFSP1Q12934 665 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 BNIP3Q12983 259 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 GPS1Q13098 491 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 TARDBPQ13148 414 aaKnown RBP eCLIP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 STX5Q13190 355 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SELENBP1Q13228 472 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 IKBKEQ14164 716 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 GRM4Q14833 912 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 POU6F1Q14863 301 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 RAB39AQ14964 217 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 ACAP1Q15027 740 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 DLG2Q15700 870 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 NPTX1Q15818 432 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SMU1Q2TAY7 513 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCDC58Q4VC31 144 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRR16Q569H4 304 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 MROH9Q5TGP6 573 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 FBXO31Q5XUX0 539 aaPredicted RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 SHQ1Q6PI26 577 aaKnown RBP5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 LDHAL6AQ6ZMR3 332 aa5.72□□□□□ -1.49
VTI1BP4-201ENST00000427516 LYSMD3Q7Z3D4 306 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms