RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SETMARQ53H47 684 aaPredicted RBP18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 ARMC12Q5T9G4 340 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 TRIQKQ629K1 86 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 IL27RAQ6UWB1 636 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZNF621Q6ZSS3 439 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 FAM45AQ8TCE6 357 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 PANX3Q96QZ0 392 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 RRAGCQ9HB90 399 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 TRPV2Q9Y5S1 764 aa18.27■□□□□ 0.51
ARHGEF28-203ENST00000426542 SMIM31A0A1B0GVY4 71 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 E5RJQ4 531 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 CAPN1P07384 714 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 UMPSP11172 480 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 PAICSP22234 425 aaKnown RBP18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 BRSK2Q8IWQ3 736 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 OR6Y1Q8NGX8 325 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 APOL4Q9BPW4 351 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 NCKAP1Q9Y2A7 1128 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 POLR1DQ9Y2S0 133 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 TCRBV5S4A2TA0A5A2 114 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZNF839A8K0R7 811 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZBTB14O43829 449 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 EARS2Q5JPH6 523 aaKnown RBP18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 PDZK1Q5T2W1 519 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 RBM43Q6ZSC3 357 aaKnown RBP18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 SPACA7Q96KW9 195 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 CATSPERZQ9NTU4 200 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 NUDT5Q9UKK9 219 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 NFASCO94856 1347 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 AKR1A1P14550 325 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 STX4Q12846 297 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 TSNQ15631 228 aaKnown RBP18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 ARMC4Q5T2S8 1044 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 GPSM1Q86YR5 675 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 SYT12Q8IV01 421 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 KPNA3O00505 521 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 RXRGP48443 463 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 WASHC2DQ5SRD0 308 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 TPGS1Q6ZTW0 290 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 ARMCX1Q9P291 453 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 CYP1A1P04798 512 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 FAM153BP0C7A2 387 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 VAV1P15498 845 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 POLR2EP19388 210 aaKnown RBP18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 RBL1P28749 1068 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 PSMD7P51665 324 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 SLC12A3P55017 1021 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 NEDD8Q15843 81 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 FAM153CQ494X1 144 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 FAM83AQ86UY5 434 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 OPTCQ9UBM4 332 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 N6AMT1Q9Y5N5 214 aa18.26■□□□□ 0.51
ARHGEF28-203ENST00000426542 ANKRD63C9JTQ0 380 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 USP12O75317 370 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 DDNO94850 711 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 IRAK1BP1Q5VVH5 260 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 SNX32Q86XE0 403 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 BCL10O95999 233 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 IFI35P80217 286 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 DPYSL3Q14195 570 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 CRY1Q16526 586 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 STK32CQ86UX6 486 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 CSGALNACT1Q8TDX6 532 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ACTRT2Q8TDY3 377 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ATXN2LQ8WWM7 1075 aaKnown RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 MRPL39Q9NYK5 338 aaKnown RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 PTPRMP28827 1452 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 NRXN1Q9ULB1 1477 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 MOXD2PA6NHM9 499 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 CACNA2D1P54289 1103 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 PREPLQ4J6C6 727 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 SCARA3Q6AZY7 606 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZPBP2Q6X784 338 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 NIPA1Q7RTP0 329 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 DSG4Q86SJ6 1040 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZNF75CPQ92670 426 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 PRCCQ92733 491 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 P2RX7Q99572 595 aaKnown RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 MYLK2Q9H1R3 596 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 DDX3XO00571 662 aaKnown RBP eCLIP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 CLOCKO15516 846 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 XYLBO75191 536 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZNF57Q68EA5 555 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 TBCDQ9BTW9 1192 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 RNF19AQ9NV58 838 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ARHGAP28Q9P2N2 729 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 DAPK2Q9UIK4 370 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ILF2Q12905 390 aaKnown RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 NAB1Q13506 487 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ACVR2BQ13705 512 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ZNF618Q5T7W0 954 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ITFG1Q8TB96 612 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 RMND5BQ96G75 393 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 KAZALD1Q96I82 304 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 ULBP1Q9BZM6 244 aa18.25■□□□□ 0.51
ARHGEF28-203ENST00000426542 SEMA6AQ9H2E6 1030 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms