RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 GLUD2P49448 558 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 NT5C2P49902 561 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 NLRP11P59045 1033 aaKnown RBP5.42□□□□□ -1.54
SFXN1-202ENST00000421887 OCA2Q04671 838 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 SRSF5Q13243 272 aaKnown RBP5.42□□□□□ -1.54
SFXN1-202ENST00000421887 ALX1Q15699 326 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 LONRF3Q496Y0 759 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 ZNF484Q5JVG2 852 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 IFIT1BQ5T764 474 aaKnown RBP5.42□□□□□ -1.54
SFXN1-202ENST00000421887 VPS53Q5VIR6 699 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 TSHZ3Q63HK5 1081 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 TWF2Q6IBS0 349 aaKnown RBP5.42□□□□□ -1.54
SFXN1-202ENST00000421887 TAS1R1Q7RTX1 841 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 TRMT1LQ7Z2T5 733 aaKnown RBP5.42□□□□□ -1.54
SFXN1-202ENST00000421887 CACNA2D4Q7Z3S7 1137 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 PALB2Q86YC2 1186 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 ACTRT2Q8TDY3 377 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 FAM3CQ92520 227 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 FGF13Q92913 245 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 ZNF707Q96C28 371 aaPredicted RBP5.42□□□□□ -1.54
SFXN1-202ENST00000421887 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 UBAC1Q9BSL1 405 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 BRD9Q9H8M2 597 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 LMAN1LQ9HAT1 526 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 VPS45Q9NRW7 570 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 SAMD15Q9P1V8 674 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 DNAJB4Q9UDY4 337 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 NEUROG3Q9Y4Z2 214 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 PCDHB6Q9Y5E3 794 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 NOX1Q9Y5S8 564 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 TDRD15B5MCY1 1934 aaKnown RBP5.42□□□□□ -1.54
SFXN1-202ENST00000421887 TICRRQ7Z2Z1 1910 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 FRMPD4Q14CM0 1322 aa5.42□□□□□ -1.54
SFXN1-202ENST00000421887 FRYQ5TBA9 3013 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 SPEGQ15772 3267 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 C4orf47A7E2U8 309 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 B5MCH6 92 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 ZNF213O14771 459 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 GPR32O75388 356 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 TDGF1P13385 188 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 SLC11A1P49279 550 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 RAB27AP51159 221 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 GYS2P54840 703 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 PROK1P58294 105 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 ACTR2P61160 394 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 SATB1Q01826 763 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 CREMQ03060 361 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 LRRC32Q14392 662 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 SRSF7Q16629 238 aaKnown RBP eCLIP5.41□□□□□ -1.54
SFXN1-202ENST00000421887 COL28A1Q2UY09 1125 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 C2orf27AQ580R0 203 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 PPM1LQ5SGD2 360 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 LIN9Q5TKA1 542 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 ESRP1Q6NXG1 681 aaKnown RBP5.41□□□□□ -1.54
SFXN1-202ENST00000421887 SPEM1Q8N4L4 309 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 PDPRQ8NCN5 879 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 DNASE1L2Q92874 299 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 PIGSQ96S52 555 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 PCYT2Q99447 389 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 NEU1Q99519 415 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 TMEM175Q9BSA9 504 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 EDEM2Q9BV94 578 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 SLC32A1Q9H598 525 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 CHST12Q9NRB3 414 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.41□□□□□ -1.54
SFXN1-202ENST00000421887 HELLSQ9NRZ9 838 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.41□□□□□ -1.54
SFXN1-202ENST00000421887 TCEAL9Q9UHQ7 104 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 DDX19BQ9UMR2 479 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 PCDHGA5Q9Y5G8 931 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 GCN1Q92616 2671 aaKnown RBP5.41□□□□□ -1.54
SFXN1-202ENST00000421887 TTC41PQ6P2S7 1318 aa5.41□□□□□ -1.54
SFXN1-202ENST00000421887 IGF2RP11717 2491 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 NUP205Q92621 2012 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 B4E1Z4 1266 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 MAGEB2O15479 319 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 TGM5O43548 720 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 ECI2O75521 394 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 RPP40O75818 363 aaKnown RBP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 EPN2O95208 641 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 TOP3BO95985 862 aaKnown RBP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 HNRNPA1P09651 372 aaKnown RBP eCLIP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 CSRP1P21291 193 aaKnown RBP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 SFPQP23246 707 aaKnown RBP eCLIP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 OR1G1P47890 313 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 MCMDC2Q4G0Z9 681 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 METRNLQ641Q3 311 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 MIS18BP1Q6P0N0 1132 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 C1orf228Q6PIY5 440 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 USP17L6PQ6QN14 398 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 KIAA0907Q7Z7F0 614 aaPredicted RBP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 ENAHQ8N8S7 591 aaPredicted RBP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 CDYL2Q8N8U2 506 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 PIBF1Q8WXW3 757 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 MTMR8Q96EF0 704 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 LRIG1Q96JA1 1093 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 ELF4Q99607 663 aaPredicted RBP5.4□□□□□ -1.54
SFXN1-202ENST00000421887 HEPHQ9BQS7 1158 aa5.4□□□□□ -1.54
SFXN1-202ENST00000421887 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms