RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 PCDHGB3Q9Y5G1 929 aa2.9□□□□□ -1.95
RNU6-1140P-201ENST00000410517 OVOS2A0A0G2JMS6 1433 aa2.9□□□□□ -1.95
RNU6-1140P-201ENST00000410517 OVOS2A0A0J9YW53 1432 aa2.9□□□□□ -1.95
RNU6-1140P-201ENST00000410517 OVOS2Q6IE36 1432 aa2.9□□□□□ -1.95
RNU6-1140P-201ENST00000410517 LRRIQ1Q96JM4 1722 aa2.9□□□□□ -1.95
RNU6-1140P-201ENST00000410517 NWD2Q9ULI1 1742 aa2.9□□□□□ -1.95
RNU6-1140P-201ENST00000410517 NRXN1Q9ULB1 1477 aa2.9□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KIF1AQ12756 1690 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 WDR27A2RRH5 827 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RRN3P2A6NIE6 340 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TTC36A6NLP5 189 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 H0Y3Z8 333 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 H7C1Q1 480 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 EIF3FO00303 357 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ZNF213O14771 459 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CTIFO43310 598 aaKnown RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ANP32CO43423 234 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 EPB41L2O43491 1005 aaKnown RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PPP6R2O75170 966 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FAM155BO75949 473 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CHRM5P08912 532 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RGPD1P0DJD0 1748 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TMIGD3P0DMS9 266 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ENGP17813 658 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GPD1P21695 349 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PAX3P23760 479 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CYP2C18P33260 490 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 THBS4P35443 961 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PRELPP51888 382 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 E2F1Q01094 437 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CFHR3Q02985 330 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GALNT1Q10472 559 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TBL3Q12788 808 aaKnown RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 NAIPQ13075 1403 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SLC12A1Q13621 1099 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SLC15A2Q16348 729 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PFKFB3Q16875 520 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KRTAP27-1Q3LI81 207 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RUNDC3AQ59EK9 446 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PCID2Q5JVF3 399 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 AKNAD1Q5T1N1 836 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 L1TD1Q5T7N2 865 aaKnown RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 INTS11Q5TA45 600 aaKnown RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TTC22Q5TAA0 569 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ANKRD40Q6AI12 368 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FAAH2Q6GMR7 532 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ANO7Q6IWH7 933 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TMEM65Q6PI78 240 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SERPINA13PQ6UXR4 307 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TRIM72Q6ZMU5 477 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 C12orf76Q8N812 135 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 C11orf44Q8N8P7 122 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CEP70Q8NHQ1 597 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 STT3BQ8TCJ2 826 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 LINC00476Q8WZB0 136 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TFAP2BQ92481 460 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ZBTB45Q96K62 511 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CCDC17Q96LX7 622 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PPM1MQ96MI6 270 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SENP7Q9BQF6 1050 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 HTATIP2Q9BUP3 242 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PDCL3Q9H2J4 239 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PRDM16Q9HAZ2 1276 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 USP29Q9HBJ7 922 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KCNK9Q9NPC2 374 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 WASH6PQ9NQA3 447 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SERTAD4Q9NUC0 356 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SRP68Q9UHB9 627 aaKnown RBP2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SLC25A13Q9UJS0 675 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GJD2Q9UKL4 321 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SLC8A2Q9UPR5 921 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CNTN6Q9UQ52 1028 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TBC1D30Q9Y2I9 924 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GDAQ9Y2T3 454 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 WNT6Q9Y6F9 365 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 USP32Q8NFA0 1604 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ATP7BP35670 1465 aa2.89□□□□□ -1.95
RNU6-1140P-201ENST00000410517 DLC1Q96QB1 1528 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CPDO75976 1380 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PCNTO95613 3336 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 GLI3P10071 1580 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TMEM232C9JQI7 657 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 E7EVH7 732 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 AP4M1O00189 453 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 IPO5O00410 1097 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 NKX2-8O15522 239 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RPP40O75818 363 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 TOMM70O94826 608 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RHOP08100 348 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KRT10P13645 584 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 VEGFAP15692 232 aaPredicted RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 NTSR1P30989 418 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 HTR7P34969 479 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PSMC2P35998 433 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PNPLA4P41247 253 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 STAT1P42224 750 aa2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CLNS1AP54105 237 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 DDX10Q13206 875 aaKnown RBP2.88□□□□□ -1.95
RNU6-1140P-201ENST00000410517 DNASE1L3Q13609 305 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms