RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 CSH1P0DML2 217 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CSH2P0DML3 217 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CRABP2P29373 138 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 MMP13P45452 471 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 PRKAA2P54646 552 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CHRNB3Q05901 458 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 DAB2IPQ5VWQ8 1189 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 LLGL2Q6P1M3 1020 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 C12orf29Q8N999 325 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 MYCBPAPQ8TBZ2 947 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 RGS18Q9NS28 235 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 VPS51Q9UID3 782 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 NAALADL1Q9UQQ1 740 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 TMEM114B3SHH9 223 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 RAD51BO15315 384 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 VAPBO95292 243 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 ALBP02768 609 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CYP1A1P04798 512 aaPredicted RBP12.36□□□□□ -0.43
PCDH20-201ENST00000409204 OR56A5P0C7T3 313 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 MGAT1P26572 445 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 SERPINA4P29622 427 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 RPL7AP62424 266 aaKnown RBP12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CDK16Q00536 496 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 KLC1Q07866 573 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 NR6A1Q15406 480 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CYP51A1Q16850 503 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 ATP6AP1LQ52LC2 224 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 MFSD4BQ5TF39 518 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 ZNF470Q6ECI4 717 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 TRMT11Q7Z4G4 463 aaKnown RBP12.36□□□□□ -0.43
PCDH20-201ENST00000409204 ZNF438Q7Z4V0 828 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 GALNT4Q8N4A0 578 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 SUSD6Q92537 303 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 RASSF10A6NK89 507 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 AQP5P55064 265 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 PRKAA1Q13131 559 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 ATP13A4Q4VNC1 1196 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 CES5AQ6NT32 575 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 MCOLN3Q8TDD5 553 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 YIPF3Q9GZM5 350 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 NMRAL1Q9HBL8 299 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 DNPEPQ9ULA0 475 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
PCDH20-201ENST00000409204 ERVK-10P10266 1014 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 KDELR1P24390 212 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 CCNG1P51959 295 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 CCL14Q16627 93 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 ANKS6Q68DC2 871 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 SYTL1Q8IYJ3 562 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 LRRC52Q8N7C0 313 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 ZFP42Q96MM3 310 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 TSPAN18Q96SJ8 248 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 IMPAD1Q9NX62 359 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 OR12D3Q9UGF7 316 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 GIT1Q9Y2X7 761 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 V9GYQ6 96 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 ADGRA3Q8IWK6 1321 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 BTNL10A8MVZ5 291 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 TPST1O60507 370 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 TRIM13O60858 407 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 POLR2EP19388 210 aaKnown RBP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 TFE3P19532 575 aaPredicted RBP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 PLIN5Q00G26 463 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 ARHGAP1Q07960 439 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 CSTF3Q12996 717 aaKnown RBP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 NFYCQ13952 458 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 TMCO5AQ8N6Q1 288 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 B3GALNT2Q8NCR0 500 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 THAP11Q96EK4 314 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 CCDC3Q9BQI4 270 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 CHST7Q9NS84 486 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 NUDT5Q9UKK9 219 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 PTCH2Q9Y6C5 1203 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 DUSP11O75319 330 aaKnown RBP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 IFNA14P01570 189 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 CHKAP35790 457 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 PPM1AP35813 382 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 NAB1Q13506 487 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 ITIH4Q14624 930 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 PARP6Q2NL67 630 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 C15orf59Q2T9L4 293 aaPredicted RBP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 CCDC153Q494R4 210 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 GLT6D1Q7Z4J2 308 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 FBXO39Q8N4B4 442 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
PCDH20-201ENST00000409204 PDZD7Q9H5P4 517 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 NCANO14594 1321 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 C22orf31O95567 290 aa12.35□□□□□ -0.43
PCDH20-201ENST00000409204 SERPINB5P36952 375 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms