RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 LMTK3Q96Q04 1460 aa8.52□□□□□ -1.04
CHD8-201ENST00000399982 MDM4O15151 490 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 BMP10O95393 424 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PLEKHA8P1O95397 391 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 FAM228BP0C875 321 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 MMP13P45452 471 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 OMPP47874 163 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PIK3CGP48736 1102 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PIWIL2Q8TC59 973 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 CMTM6Q9NX76 183 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 TELO2Q9Y4R8 837 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PCDHB7Q9Y5E2 793 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 APOL3O95236 402 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 OGNP20774 298 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 TGM2P21980 687 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ALDH3A2P51648 485 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 GEMP55040 296 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 CDC42P60953 191 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 VAC14Q08AM6 782 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ZNF268Q14587 947 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 DHX33Q9H6R0 707 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 SPAG4Q9NPE6 437 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 FBXO10Q9UK96 956 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 AGO2Q9UKV8 859 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 PCDHGC5Q9Y5F6 944 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD8-201ENST00000399982 SHROOM2Q13796 1616 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ARPC4-TTLL3A0A0A6YYG9 625 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ARHGEF33A8MVX0 844 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 RNASEH1O60930 286 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 AKR1B1P15121 316 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PDGFRAP16234 1089 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 S100A2P29034 98 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ERP29P30040 261 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 PRDX6P30041 224 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 HERVK_113P62684 666 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 HSF2Q03933 536 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 SCN1BQ07699 218 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 STARD3Q14849 445 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ATG14Q6ZNE5 492 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 RD3Q7Z3Z2 195 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 DSEQ9UL01 958 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PLA2R1Q13018 1463 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 BBIP1A8MTZ0 92 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 DNAJA2O60884 412 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 TGDSO95455 350 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 HARS2P49590 506 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 SMIM11AP58511 58 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 POLD3Q15054 466 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 FGD3Q5JSP0 725 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 FOXR2Q6PJQ5 311 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 CPNE1Q99829 537 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ZNF341Q9BYN7 854 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 TBC1D24Q9ULP9 559 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 TDRKHQ9Y2W6 561 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD8-201ENST00000399982 MRASO14807 208 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PENKP01210 267 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 SQLEQ14534 574 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 CHRDL2Q6WN34 429 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 ZNF615Q8N8J6 731 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 TRNT1Q96Q11 434 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 TBCBQ99426 244 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 MMP19Q99542 508 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 CINPQ9BW66 212 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 RASSF1Q9NS23 344 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 PCYOX1Q9UHG3 505 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 LNPEPQ9UIQ6 1025 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 SCAF8Q9UPN6 1271 aaKnown RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 SNX9Q9Y5X1 595 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 AP4B1Q9Y6B7 739 aa8.52□□□□□ -1.05
CHD8-201ENST00000399982 POLR1AO95602 1720 aaPredicted RBP8.52□□□□□ -1.05
CHD8-201ENST00000399982 TRAFD1O14545 582 aaPredicted RBP8.51□□□□□ -1.05
CHD8-201ENST00000399982 LRG1P02750 347 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 FCER1AP12319 257 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 C12orf56Q8IXR9 622 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 EEF1AKMT1Q8WVE0 214 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 ZNF669Q96BR6 464 aaPredicted RBP8.51□□□□□ -1.05
CHD8-201ENST00000399982 KIAA1683Q9H0B3 1180 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 MTIF3Q9H2K0 278 aaKnown RBP8.51□□□□□ -1.05
CHD8-201ENST00000399982 TOR4AQ9NXH8 423 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 RUVBL2Q9Y230 463 aaKnown RBP8.51□□□□□ -1.05
CHD8-201ENST00000399982 CAPN6Q9Y6Q1 641 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 ETS1P14921 441 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 GPD1P21695 349 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 PSME3P61289 254 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 EIF5AP63241 154 aaKnown RBP8.51□□□□□ -1.05
CHD8-201ENST00000399982 RGS1Q08116 209 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 SMYD1Q8NB12 490 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 WDR41Q9HAD4 459 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 NUDT5Q9UKK9 219 aa8.51□□□□□ -1.05
CHD8-201ENST00000399982 ITGA11Q9UKX5 1188 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms