RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 FASTKQ14296 549 aaKnown RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 CRY1Q16526 586 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 FSCN1Q16658 493 aaKnown RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 NDNQ99608 321 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 MCUBQ9NWR8 336 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 KLQ9UEF7 1012 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 RABGEF1Q9UJ41 708 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 AREL1O15033 823 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 IKBKEQ14164 716 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 N4BP2L1Q5TBK1 243 aaPredicted RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 ZNF470Q6ECI4 717 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 ULK3Q6PHR2 472 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 RAD9BQ6WBX8 426 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 POU5F2Q8N7G0 328 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 SLC2A14Q8TDB8 520 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 SLC40A1Q9NP59 571 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 ZNF222Q9UK12 451 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 PDE5AO76074 875 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
RGP1-201ENST00000378078 PTPAQ15257 358 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 ARSJQ5FYB0 599 aaPredicted RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 TMEM132CQ8N3T6 1108 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 TMEM114B3SHH9 223 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 KCNK1O00180 336 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 ITGADQ13349 1161 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 STX12Q86Y82 276 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 SMYD1Q8NB12 490 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 CDCA5Q96FF9 252 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 C1QTNF7Q9BXJ2 289 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 TUBGCP4Q9UGJ1 667 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 UBDO15205 165 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 RPA3P35244 121 aaPredicted RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 CASP9P55211 416 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 HHIPL2Q6UWX4 724 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 IQSEC2Q5JU85 1478 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 TRAV19A0A0A6YYK7 116 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 SH3D21A4FU49 640 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 LIN7AO14910 233 aaPredicted RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 PSIP1O75475 530 aaKnown RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 CD86P42081 329 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 NFIAQ12857 509 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 DGKZQ13574 1117 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 PREPLQ4J6C6 727 aaPredicted RBP16.6■□□□□ 0.25
RGP1-201ENST00000378078 SERPINA13PQ6UXR4 307 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 USP45Q70EL2 814 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 CDH24Q86UP0 819 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 HELQQ8TDG4 1101 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 ZBTB10Q96DT7 871 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 ACAT2Q9BWD1 397 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 KCNF1Q9H3M0 494 aa16.6■□□□□ 0.25
RGP1-201ENST00000378078 ITGA9Q13797 1035 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 NR1I3Q14994 352 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ZBTB49Q6ZSB9 765 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 FAM220AQ7Z4H9 259 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ZNF563Q8TA94 476 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 METTL6Q8TCB7 284 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 RHOBTB3O94955 611 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ANXA5P08758 320 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 PIK3R1P27986 724 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 CLK3P49761 638 aaKnown RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 NUP107P57740 925 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 FAM98BQ52LJ0 330 aaKnown RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 KLHL4Q9C0H6 718 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 SEPT4O43236 478 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 RRM1P23921 792 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 LSM3P62310 102 aaKnown RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 ZNF677Q86XU0 584 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 GPSM1Q86YR5 675 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 CLEC4MQ9H2X3 399 aaPredicted RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 ARMC12Q5T9G4 340 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 LRIG3Q6UXM1 1119 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 LNX2Q8N448 690 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 SMARCD1Q96GM5 515 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TMEM237Q96Q45 408 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 PRRG3Q9BZD7 231 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 CATSPERZQ9NTU4 200 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ANKEF1Q9NU02 776 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 MRPS23Q9Y3D9 190 aaKnown RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 CCT8L1PA6NM43 557 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 GYPCP04921 128 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 SERPINF2P08697 491 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 RPA1P27694 616 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 NTSP30990 170 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 PCDHA11Q9Y5I1 949 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3DA0A087WVF3 549 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3IA0A087WXS9 549 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3EA0A087X179 549 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3KA0A087X1G2 549 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3FA6NER0 549 aaPredicted RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 CENPXA8MT69 81 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3LB9A6J9 549 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TPD52L2O43399 206 aaKnown RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3HP0C7X1 549 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms