RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 NEMP1O14524 444 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 KLHL41O60662 606 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 PROCP04070 461 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 GRM5P41594 1212 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 TEX44Q53QW1 395 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 PRAMEF19Q5SWL8 479 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 LRRC8BQ6P9F7 803 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 NCCRP1Q6ZVX7 275 aaPredicted RBP13.76□□□□□ -0.21
CTDP1-202ENST00000299543 TTC39CQ8N584 583 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 APPL2Q8NEU8 664 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 SLC7A14Q8TBB6 771 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 RTP4Q96DX8 246 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 QKIQ96PU8 341 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTDP1-202ENST00000299543 PANX3Q96QZ0 392 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
CTDP1-202ENST00000299543 KLF11O14901 512 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 HUS1O60921 280 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 COL6A2P12110 1019 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SERPINB6P35237 376 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SYPL2Q5VXT5 272 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 GRAMD4Q6IC98 578 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 C14orf80Q86SX3 495 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SIX6OS1Q8N1H7 587 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 OR6J1Q8NGC5 347 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 CDCA5Q96FF9 252 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 C16orf70Q9BSU1 422 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 MROH8Q9H579 483 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 DPYSL4O14531 572 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 HOXA11P31270 313 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 NR2C2P49116 596 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 ATXN3P54252 364 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 HIC1Q14526 733 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 PKDCCQ504Y2 493 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 HSP90AA5PQ58FG0 334 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 TCHHL1Q5QJ38 904 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 TAPT1Q6NXT6 567 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 KDELC2Q7Z4H8 507 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 ECSITQ9BQ95 431 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 OXCT2Q9BYC2 517 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 NDE1Q9NXR1 346 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 STX18Q9P2W9 335 aaKnown RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 GJD2Q9UKL4 321 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 EEF2KO00418 725 aaKnown RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 CXCL11O14625 94 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 DCXO43602 365 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 BEST1O76090 585 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 RALBP11234 206 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 TPSB2P20231 275 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 IGFBP6P24592 240 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 DLG1Q12959 904 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 TPSAB1Q15661 275 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SPDYAQ5MJ70 313 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 ZNF362Q5T0B9 420 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SLC27A1Q6PCB7 646 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 HFE2Q6ZVN8 426 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SLC26A9Q7LBE3 791 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 STRA8Q7Z7C7 330 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SLC15A3Q8IY34 581 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 RAB3IL1Q8TBN0 382 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 DNAJB3Q8WWF6 145 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 NFKBIZQ9BYH8 718 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 ANGPTL2Q9UKU9 493 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 SNX10Q9Y5X0 201 aa13.75□□□□□ -0.21
CTDP1-202ENST00000299543 CAPN14A8MX76 684 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 PLIN3O60664 434 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 HSPA4LO95757 839 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 POLBP06746 335 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 CDK4P11802 303 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 SEMA5AQ13591 1074 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 GRAMD1BQ3KR37 738 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 SFT2D3Q587I9 215 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 TEDDM1Q5T9Z0 273 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 ZNF567Q8N184 647 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTDP1-202ENST00000299543 MOCS1Q9NZB8 636 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 CITO14578 2027 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 FOXD2O60548 495 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-202ENST00000299543 GLRA3O75311 464 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 STAMBPO95630 424 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 ANPEPP15144 967 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 GJA8P48165 433 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 GLRBP48167 497 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 AP2B1P63010 937 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 DSG1Q02413 1049 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 KYAT1Q16773 422 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 ZNF778Q96MU6 729 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 SPATA7Q9P0W8 599 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 EMCNQ9ULC0 261 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 RGPD3A6NKT7 1758 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-202ENST00000299543 RGPD4Q7Z3J3 1758 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 NDUFB5O43674 189 aa13.74□□□□□ -0.21
CTDP1-202ENST00000299543 TM7SF2O76062 418 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms