RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 CDHR3Q6ZTQ4 885 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 PSMA8Q8TAA3 256 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 COPS5Q92905 334 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 EPS8L2Q9H6S3 715 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 ZFYVE28Q9HCC9 887 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 SEPT3Q9UH03 358 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 MYPNQ86TC9 1320 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 TRAFD1O14545 582 aaPredicted RBP13.58□□□□□ -0.24
CCDC117-201ENST00000249064 ITM2AO43736 263 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 TYROBPO43914 113 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 S100A1P23297 94 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 SEPT1Q8WYJ6 367 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 SKA1Q96BD8 255 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 PLEKHA8Q96JA3 519 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 ZNF541Q9H0D2 1346 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 CLK4Q9HAZ1 481 aaKnown RBP13.58□□□□□ -0.24
CCDC117-201ENST00000249064 SLC17A6Q9P2U8 582 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 EGFL7Q9UHF1 273 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 SATB2Q9UPW6 733 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
CCDC117-201ENST00000249064 CCNT2O60583 730 aaKnown RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 ALBP02768 609 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 SLC5A2P31639 672 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 GTF2A2P52657 109 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 GPX6P59796 221 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 RELAQ04206 551 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 DNASE1L3Q13609 305 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PRKD1Q15139 912 aaPredicted RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PITRM1Q5JRX3 1037 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 ATF7IP2Q5U623 682 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 SEL1L3Q68CR1 1132 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 TMEM26Q6ZUK4 368 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 CMC1Q7Z7K0 106 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 FAM83AQ86UY5 434 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 DENND1AQ8TEH3 1009 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 MOCOSQ96EN8 888 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 AVENQ9NQS1 362 aaPredicted RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 C6orf203Q9P0P8 240 aaPredicted RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 CDC14AQ9UNH5 594 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 SERPINE1P05121 402 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 TFAP2AP05549 437 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 UNGP13051 313 aaPredicted RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 LCP1P13796 627 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PORP16435 677 aaPredicted RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 ZNF182P17025 639 aaPredicted RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 UBE3AQ05086 875 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 DPYSL3Q14195 570 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 CYP1B1Q16678 543 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 EFCAB12Q6NXP0 572 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PLD3Q8IV08 490 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 DDIASQ8IXT1 998 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 CPT1BQ92523 772 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 DCPSQ96C86 337 aaKnown RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 TUBA8Q9NY65 449 aaPredicted RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PLLPQ9Y342 182 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 SPAG6O75602 509 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 GMPRP36959 345 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 SNRPFP62306 86 aaKnown RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 EFHC2Q5JST6 749 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PID1Q7Z2X4 250 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 SAMD3Q8N6K7 520 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 AGBL3Q8NEM8 1001 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 C12orf43Q96C57 262 aaKnown RBP13.57□□□□□ -0.24
CCDC117-201ENST00000249064 CEP19Q96LK0 163 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 PKP2Q99959 881 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 DSEQ9UL01 958 aa13.57□□□□□ -0.24
CCDC117-201ENST00000249064 TPP1O14773 563 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 MAGEB2O15479 319 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 SNX2O60749 519 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 USP12O75317 370 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ADSLP30566 484 aaPredicted RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 STIP1P31948 543 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 NAMPTP43490 491 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 THOP1P52888 689 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 KLF10Q13118 480 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 CAPSQ13938 189 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 CYP2A13Q16696 494 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 METTL21CQ5VZV1 264 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 FBXL19Q6PCT2 694 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ADGRD1Q6QNK2 874 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ERI1Q8IV48 349 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ZNF669Q96BR6 464 aaPredicted RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 BTBD9Q96Q07 612 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 ASNSD1Q9NWL6 643 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 KLHL8Q9P2G9 620 aaPredicted RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 MICAL3Q7RTP6 2002 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 INPP4BO15327 924 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 VNN1O95497 513 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 TXNP10599 105 aaKnown RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 NAGLUP54802 743 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 POLD3Q15054 466 aaPredicted RBP13.56□□□□□ -0.24
CCDC117-201ENST00000249064 TRIM60Q495X7 471 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 PAGE2BQ5JRK9 111 aa13.56□□□□□ -0.24
CCDC117-201ENST00000249064 TEDDM1Q5T9Z0 273 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms