RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Dlk2Q8K1E3 382 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Nrbf2Q8VCQ3 287 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Map3k21Q8VDG6 1002 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pih1d1Q9CQJ2 290 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mapk9Q9WTU6 423 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Scnn1bQ9WU38 638 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 RptorQ8K4Q0 1335 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 4921501E09RikA0A0R4J054 908 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm8897L7N294 181 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm3739L7N296 216 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Chrna1P04756 457 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Impdh2P24547 514 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rpl36P47964 105 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 MipP51180 263 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ccna2P51943 422 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Naaladl1Q7M758 745 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Suz12Q80U70 741 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Npas4Q8BGD7 802 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Exd2Q8VEG4 650 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 CmasQ99KK2 432 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mfsd10Q9D2V8 456 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gbp4A4UUI3 631 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Top6blJ3QMY9 579 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PdgfrbP05622 1098 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 FechP22315 420 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gsdmc4Q3TR54 480 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pbxip1Q3TVI8 727 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rap1gap2Q5SVL6 712 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Plk4Q64702 925 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PapolgQ6PCL9 739 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Zbtb9Q8CDC7 459 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Dmtf1Q8CE22 761 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Reep3Q99KK1 254 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 ArskQ9D2L1 553 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Xrn2Q9DBR1 951 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Umodl1Q5DID3 1319 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 A930018M24RikB7ZMY3 218 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Zfp457L7N1X4 647 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 KlO35082 1014 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PrnpP04925 254 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 RpsaP14206 295 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Lmo2P25801 158 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vps26aP40336 327 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 CartptP56388 129 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 NcstnP57716 708 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Crnkl1P63154 690 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 GmncQ3URY2 333 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Serpinb6Q60854 378 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Hist2h2acQ64523 129 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Hist2h2aa1Q6GSS7 130 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Q8BGC1 442 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 AgpsQ8C0I1 645 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vmn1r218Q8R261 298 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Sdcbp2Q99JZ0 292 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Lysmd3Q99LE3 305 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Decr1Q9CQ62 335 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Atad1Q9D5T0 361 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 H2afb2S4R1M3 115 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Col4a1P02463 1669 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ercc2O08811 760 aaKnown RBP12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PurbO35295 324 aaKnown RBP12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 CratP47934 626 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 CiitaP79621 1155 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Otol1Q4ZJM7 482 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Xlr3aQ60595 226 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cdc14bQ6PFY9 485 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rbm12b1Q80YR9 836 aaKnown RBP12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ldlrap1Q8C142 308 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm5591Q8CDK1 855 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pbld2Q9CXN7 288 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 NvlQ9DBY8 855 aaKnown RBP12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Dpysl5Q9EQF6 564 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Vwa7Q9JHA8 891 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Elf4Q9Z2U4 655 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cntnap5aQ0V8T9 1304 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cyp2t4E9PWV0 503 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gstt1Q64471 240 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pcmtd2Q8BHD8 359 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Wdr59Q8C0M0 992 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Syt12Q920N7 421 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ankrd31A0A140LI88 1765 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm4846B2RWH8 538 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 D3Z070 196 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mbl1P39039 239 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Smpdl3aP70158 445 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Adam39Q7M762 756 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Letm2Q7TNU7 480 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cyp2d26Q8CIM7 500 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Clec4a3Q8JZX6 237 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Nphs1Q9QZS7 1256 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Klrc2Q9WTJ9 238 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm6408J3QNG1 320 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 H2-Eb1P04230 264 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Grik1Q60934 836 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Znf598Q80YR4 908 aaKnown RBP12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Taf10Q8K0H5 218 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Akr1c20Q8VC77 323 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ferd3lQ923Z4 168 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 RragcQ99K70 398 aa12.1□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Zfp655Q9CZP3 541 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms